DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VHTSS
Uniprot ID:
A8MVW5
Source protein:
HEPACAM family member 2
Source gene:
HEPACAM2
Class:
DEG_SPOP_SBC_1
Location:
189:193
E3 ligase:
SPOP
DEGRON score:
0.8164
ASA_SCORE:
65.18
COIL:
0.8464
CONS_SCORE:
0.4935
DSS_SCORE:
0.3878
HELIX:
0.0126
FCONS_SCORE:
0.7478
RIG_SCORE:
0.7319
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T203A
TCGA-BH-A18G
BRCA
TCGA
VHTSS
DEG_SPOP_SBC_1
0.5
p.S196F
TCGA-D3-A1Q5
SKCM
TCGA
VHTSS
DEG_SPOP_SBC_1
0.25
p.S196F
TCGA-EE-A2GC
SKCM
TCGA
VHTSS
DEG_SPOP_SBC_1
0.25
p.S196F
DO37839
SKCM
ICGC
VHTSS
DEG_SPOP_SBC_1
0.25
p.S196F
DO37827
SKCM
ICGC
VHTSS
DEG_SPOP_SBC_1
0.25
p.G186E
TCGA-FW-A3R5
SKCM
TCGA
VHTSS
DEG_SPOP_SBC_1
0.25
p.H193Y
DO48435
BLCA
ICGC
VHTSS
DEG_SPOP_SBC_1
0.7229
p.H193Y
DO37782
SKCM
ICGC
VHTSS
DEG_SPOP_SBC_1
0.7229
p.T191A
DO3686
BRCA
ICGC
VHTSS
DEG_SPOP_SBC_1
0.7139
p.S186P
DO223065
ESCA
ICGC
VHTSS
DEG_SPOP_SBC_1
0.25
p.D201N
DO49067
HNSC
ICGC
VHTSS
DEG_SPOP_SBC_1
0.1111
p.M189V
SIDM00234
Other Solid Cancers
GDSC
VHTSS
DEG_SPOP_SBC_1
0.7208
p.M189V
TC-YIK
cervix
COSMIC
VHTSS
DEG_SPOP_SBC_1
0.7208
p.G198V
SIDM00832
Colorectal Carcinoma
GDSC
VHTSS
DEG_SPOP_SBC_1
0.1944
p.G198V
SW948
large_intestine
COSMIC
VHTSS
DEG_SPOP_SBC_1
0.1944
p.S180Y
SIDM00683
Prostate Carcinoma
GDSC
VHTSS
DEG_SPOP_SBC_1
0.0833
p.S180Y
LNCaP-Clone-FGC
prostate
COSMIC
VHTSS
DEG_SPOP_SBC_1
0.0833
p.H190Y
ACH-000641
Leukemia
CCLE
VHTSS
DEG_SPOP_SBC_1
0.6118
p.H190Y
ACH-001036
Leukemia
CCLE
VHTSS
DEG_SPOP_SBC_1
0.6118
p.H190Y
CMK
haematopoietic_and_lymphoid_tissue
COSMIC
VHTSS
DEG_SPOP_SBC_1
0.6118
p.K199E
NUGC-4
stomach
COSMIC
VHTSS
DEG_SPOP_SBC_1
0.1667
p.D201V
MC-CAR
haematopoietic_and_lymphoid_tissue
COSMIC
VHTSS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with HEPACAM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VHTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8MVW5
HEPACAM family member 2
DEG_SPOP_SBC_1
189:193
VHTSS
SPOP
0.8164
More...
Q5H9F3
BCL-6 corepressor-like protein 1
DEG_SPOP_SBC_1
650:654
VHTSS
SPOP
0.9938
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
1851:1855
VHTSS
SPOP
0.5519
More...
A8MX19
Putative protein FAM90A12P
DEG_SPOP_SBC_1
152:156
VHTSS
SPOP
0.9805
More...