DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VKENS
Uniprot ID:
Q15025
Source protein:
TNFAIP3-interacting protein 1
Source gene:
TNIP1
Class:
DEG_APCC_KENBOX_2
Location:
29:33
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.582
ASA_SCORE:
84.18
COIL:
0.0586
CONS_SCORE:
0.5888
DSS_SCORE:
0.3938
HELIX:
0.9428
FCONS_SCORE:
1.1944
RIG_SCORE:
0.7823
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K38N
TCGA-B5-A0JY
UCEC
TCGA
VKENS
DEG_APCC_KENBOX_2
0.3056
p.K38N
DO43041
UCEC
ICGC
VKENS
DEG_APCC_KENBOX_2
0.3056
p.S22F
TCGA-XF-AAMX
BLCA
TCGA
VKENS
DEG_APCC_KENBOX_2
0.1389
p.S22F
DO51939
BLCA
ICGC
VKENS
DEG_APCC_KENBOX_2
0.1389
p.A23T
DO227882
PBCA
ICGC
VKENS
DEG_APCC_KENBOX_2
0.1667
p.R27H
SIDM00072
Non-Cancerous
GDSC
VKENS
DEG_APCC_KENBOX_2
0.2778
p.A23S
SIDM00968
Ovarian Carcinoma
GDSC
VKENS
DEG_APCC_KENBOX_2
0.1667
p.A23S
SIDM01215
Ovarian Carcinoma
GDSC
VKENS
DEG_APCC_KENBOX_2
0.1667
p.A23S
ACH-000542
Ovarian Cancer
CCLE
VKENS
DEG_APCC_KENBOX_2
0.1667
p.A23S
ACH-002140
Ovarian Cancer
CCLE
VKENS
DEG_APCC_KENBOX_2
0.1667
p.A23S
Hey
ovary
COSMIC
VKENS
DEG_APCC_KENBOX_2
0.1667
Drug responses associated with TNIP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VKENS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95391
Pre-mRNA-splicing factor SLU7
DEG_APCC_KENBOX_2
106:110
VKENS
APC,CDC20,FZR1
0.6647
More...
Q15025
TNFAIP3-interacting protein 1
DEG_APCC_KENBOX_2
29:33
VKENS
APC,CDC20,FZR1
0.582
More...
P51815
Zinc finger protein 75D
DEG_APCC_KENBOX_2
26:30
VKENS
APC,CDC20,FZR1
0.6713
More...
Q8N7Z5
Ankyrin repeat domain-containing protein 31
DEG_APCC_KENBOX_2
894:898
VKENS
APC,CDC20,FZR1
0.9707
More...