DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VNSST
Uniprot ID:
O15234
Source protein:
Protein CASC3
Source gene:
CASC3
Class:
DEG_SPOP_SBC_1
Location:
123:127
E3 ligase:
SPOP
DEGRON score:
0.9752
ASA_SCORE:
90.2
COIL:
0.747
CONS_SCORE:
0.4012
DSS_SCORE:
0.7
HELIX:
0.214
FCONS_SCORE:
1.001
RIG_SCORE:
0.6188
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E118K
TCGA-44-2659
LUAD
TCGA
VNSST
DEG_SPOP_SBC_1
0.1944
p.E118K
DO23744
LUAD
ICGC
VNSST
DEG_SPOP_SBC_1
0.1944
p.D121Y
DO229027
LICA
ICGC
VNSST
DEG_SPOP_SBC_1
0.2778
Drug responses associated with CASC3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VNSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15234
Protein CASC3
DEG_SPOP_SBC_1
123:127
VNSST
SPOP
0.9752
More...
O75044
SLIT-ROBO Rho GTPase-activating protein 2
DEG_SPOP_SBC_1
1056:1060
VNSST
SPOP
0.9566
More...
P82094
TATA element modulatory factor
DEG_SPOP_SBC_1
360:364
VNSST
SPOP
0.9561
More...
Q16181
Septin-7
DEG_SPOP_SBC_1
15:19
VNSST
SPOP
0.6742
More...
Q6IQ55
Tau-tubulin kinase 2
DEG_SPOP_SBC_1
1065:1069
VNSST
SPOP
0.9545
More...