DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
VNSST
Uniprot ID:
Q6IQ55
Source protein:
Tau-tubulin kinase 2
Source gene:
TTBK2
Class:
DEG_SPOP_SBC_1
Location:
1065:1069
E3 ligase:
SPOP
DEGRON score:
0.9545
ASA_SCORE:
77.7
COIL:
0.8862
CONS_SCORE:
0.3702
DSS_SCORE:
0.5265
HELIX:
0.079
FCONS_SCORE:
0.8948
RIG_SCORE:
0.6306
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T1069I
TCGA-AB-2826
LAML
TCGA
VNSST
DEG_SPOP_SBC_1
0.7078
p.T1069I
DO21833
LAML
ICGC
VNSST
DEG_SPOP_SBC_1
0.7078
p.S1070L
TCGA-AN-A046
BRCA
TCGA
VNSST
DEG_SPOP_SBC_1
0.3056
p.S1070L
TCGA-BR-8680
STAD
TCGA
VNSST
DEG_SPOP_SBC_1
0.3056
p.S1070L
DO1285
BRCA
ICGC
VNSST
DEG_SPOP_SBC_1
0.3056
p.S1070L
DO47769
STAD
ICGC
VNSST
DEG_SPOP_SBC_1
0.3056
p.S1058L
TCGA-D3-A2JE
SKCM
TCGA
VNSST
DEG_SPOP_SBC_1
0.1389
p.S1058L
DO219476
SKCM
ICGC
VNSST
DEG_SPOP_SBC_1
0.1389
p.D1063Y
DO48382
BLCA
ICGC
VNSST
DEG_SPOP_SBC_1
0.2778
p.W1059C
DO227802
COCA
ICGC
VNSST
DEG_SPOP_SBC_1
0.1667
p.P1079Q
DO229037
LICA
ICGC
VNSST
DEG_SPOP_SBC_1
0.0556
p.S1071F
DO45183
LIRI
ICGC
VNSST
DEG_SPOP_SBC_1
0.2778
p.T1062I
SIDM00211
B-Lymphoblastic Leukemia
GDSC
VNSST
DEG_SPOP_SBC_1
0.25
p.T1062I
SIDM01056
Breast Carcinoma
GDSC
VNSST
DEG_SPOP_SBC_1
0.25
p.A1063V
HT-3
cervix
COSMIC
VNSST
DEG_SPOP_SBC_1
0.2778
Drug responses associated with TTBK2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VNSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15234
Protein CASC3
DEG_SPOP_SBC_1
123:127
VNSST
SPOP
0.9752
More...
O75044
SLIT-ROBO Rho GTPase-activating protein 2
DEG_SPOP_SBC_1
1056:1060
VNSST
SPOP
0.9566
More...
P82094
TATA element modulatory factor
DEG_SPOP_SBC_1
360:364
VNSST
SPOP
0.9561
More...
Q16181
Septin-7
DEG_SPOP_SBC_1
15:19
VNSST
SPOP
0.6742
More...
Q6IQ55
Tau-tubulin kinase 2
DEG_SPOP_SBC_1
1065:1069
VNSST
SPOP
0.9545
More...