DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VNSST
Uniprot ID:
O75044
Source protein:
SLIT-ROBO Rho GTPase-activating protein 2
Source gene:
SRGAP2
Class:
DEG_SPOP_SBC_1
Location:
1056:1060
E3 ligase:
SPOP
DEGRON score:
0.9566
ASA_SCORE:
94.88
COIL:
0.958
CONS_SCORE:
0.2489
DSS_SCORE:
0.6536
HELIX:
0.017
FCONS_SCORE:
0.931
RIG_SCORE:
0.57
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1062A
SIDM02044
Colorectal Carcinoma
GDSC
VNSST
DEG_SPOP_SBC_1
0.2778
p.P1047S
SIDM00045
Gastric Carcinoma
GDSC
VNSST
DEG_SPOP_SBC_1
0.0833
p.P1047S
HSC-39
stomach
COSMIC
VNSST
DEG_SPOP_SBC_1
0.0833
p.P1046S
HSC-39
stomach
COSMIC
VNSST
DEG_SPOP_SBC_1
0.0556
Drug responses associated with SRGAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VNSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15234
Protein CASC3
DEG_SPOP_SBC_1
123:127
VNSST
SPOP
0.9752
More...
O75044
SLIT-ROBO Rho GTPase-activating protein 2
DEG_SPOP_SBC_1
1056:1060
VNSST
SPOP
0.9566
More...
P82094
TATA element modulatory factor
DEG_SPOP_SBC_1
360:364
VNSST
SPOP
0.9561
More...
Q16181
Septin-7
DEG_SPOP_SBC_1
15:19
VNSST
SPOP
0.6742
More...
Q6IQ55
Tau-tubulin kinase 2
DEG_SPOP_SBC_1
1065:1069
VNSST
SPOP
0.9545
More...