DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VNSST
Uniprot ID:
P82094
Source protein:
TATA element modulatory factor
Source gene:
TMF1
Class:
DEG_SPOP_SBC_1
Location:
360:364
E3 ligase:
SPOP
DEGRON score:
0.9561
ASA_SCORE:
91.88
COIL:
0.912
CONS_SCORE:
0.3011
DSS_SCORE:
0.3784
HELIX:
0.0176
FCONS_SCORE:
0.9407
RIG_SCORE:
0.7091
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N361H
TCGA-CA-6717
COAD
TCGA
VNSST
DEG_SPOP_SBC_1
0.6312
p.N361H
DO8264
COAD
ICGC
VNSST
DEG_SPOP_SBC_1
0.6312
p.A373T
TCGA-D8-A1JA
BRCA
TCGA
VNSST
DEG_SPOP_SBC_1
0.0833
p.A373T
DO2819
BRCA
ICGC
VNSST
DEG_SPOP_SBC_1
0.0833
p.S363L
TCGA-VS-A958
CESC
TCGA
VNSST
DEG_SPOP_SBC_1
0.7667
p.S363L
DO51639
CESC
ICGC
VNSST
DEG_SPOP_SBC_1
0.7667
Drug responses associated with TMF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VNSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15234
Protein CASC3
DEG_SPOP_SBC_1
123:127
VNSST
SPOP
0.9752
More...
O75044
SLIT-ROBO Rho GTPase-activating protein 2
DEG_SPOP_SBC_1
1056:1060
VNSST
SPOP
0.9566
More...
P82094
TATA element modulatory factor
DEG_SPOP_SBC_1
360:364
VNSST
SPOP
0.9561
More...
Q16181
Septin-7
DEG_SPOP_SBC_1
15:19
VNSST
SPOP
0.6742
More...
Q6IQ55
Tau-tubulin kinase 2
DEG_SPOP_SBC_1
1065:1069
VNSST
SPOP
0.9545
More...