DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VNSTS
Uniprot ID:
Q9ULK2
Source protein:
Ataxin-7-like protein 1
Source gene:
ATXN7L1
Class:
DEG_SPOP_SBC_1
Location:
817:821
E3 ligase:
SPOP
DEGRON score:
0.9972
ASA_SCORE:
84.42
COIL:
0.9154
CONS_SCORE:
0.3738
DSS_SCORE:
0.6466
HELIX:
0.0574
FCONS_SCORE:
1.0953
RIG_SCORE:
0.6338
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A811T
TCGA-AY-6197
COAD
TCGA
VNSTS
DEG_SPOP_SBC_1
0.1667
p.A811T
DO9956
COAD
ICGC
VNSTS
DEG_SPOP_SBC_1
0.1667
p.A811T
ACH-000799
Skin Cancer
CCLE
VNSTS
DEG_SPOP_SBC_1
0.1667
p.P816L
SIDM00550
Esophageal Squamous Cell Carcinoma
GDSC
VNSTS
DEG_SPOP_SBC_1
0.3056
p.P816L
ACH-002264
Esophageal Cancer
CCLE
VNSTS
DEG_SPOP_SBC_1
0.3056
p.P816L
KYSE-50
oesophagus
COSMIC
VNSTS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with ATXN7L1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VNSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P23468
Receptor-type tyrosine-protein phosphatase delta
DEG_SPOP_SBC_1
723:727
VNSTS
SPOP
0.6245
More...
Q8NI17
Interleukin-31 receptor subunit alpha
DEG_SPOP_SBC_1
165:169
VNSTS
SPOP
0.8554
More...
Q9UPP5
AP2-interacting clathrin-endocytosis protein
DEG_SPOP_SBC_1
821:825
VNSTS
SPOP
0.8426
More...
Q9ULK2
Ataxin-7-like protein 1
DEG_SPOP_SBC_1
817:821
VNSTS
SPOP
0.9972
More...