Gene: PDGFC

Basic information

Tag Content
Uniprot ID A0A452ET29
Entrez ID 102168934
Genbank protein ID
Genbank nucleotide ID XM_005691309.3
Ensembl protein ID ENSCHIP00000015270
Ensembl nucleotide ID ENSCHIG00000015981
Gene name Uncharacterized protein
Gene symbol PDGFC
Organism Capra hircus
NCBI taxa ID 9925
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MGVCGKCPAR LGGQSRRGAS RPARPSPGGA DPGPEPRSPS ARRPRARPLS PMLLFGLLLL 60
TSALAGQRPG TRAESNLSSK LQLGSNKEQN GVQDPQHERI ITVSTNGSIH SPRFPHTYPR 120
NMDLVWRLVA VEENVWIQLT FDERFGLEDP EDDICKYDFV EVEEPSDGTI LGRWCGSGSV 180
PGKQISKGNQ IRIRFVSDEY FPSEPGFCIH YNIVMPQLTE TVSPSSLPAS ALPLDLLNNA 240
VTAFSTLEDL IRYLEPDRWQ LDLEDLYRPT SLQLLGKNFM FGRKSRVVDL NLLKEEVRLY 300
SCTPRNFSVS VREELKRTDT IFWPGCLLVK RCGGNCACCL QTCSECQCVP SKVTKKYHEV 360
LQLRPKTGVR GLHKSLTDVA LEHHEECDCV CRGNPGG 397

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologPDGFC102168934A0A452ET29Capra hircusPredictionMore>>
1:1 orthologPDGFC100062015A0A3Q2HV05Equus caballusPredictionMore>>
1:1 orthologPDGFC56034Q9NRA1Homo sapiensPublicationMore>>
1:1 orthologPdgfc54635Q8CI19CPOE12.5, E13.5Mus musculusPublicationMore>>
1:1 orthologPDGFCH2QQC3Pan troglodytesPredictionMore>>
1:1 orthologA0A481CL63Sus scrofaPredictionMore>>
1:1 orthologPDGFC100350272G1TDA1Oryctolagus cuniculusPredictionMore>>
1:1 orthologPdgfc79429Q9EQX6Rattus norvegicusPredictionMore>>
1:1 orthologpdgfc560564E7FB33Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0009986 cell surface
GO:0005829 cytosol
GO:0005615 extracellular space
GO:0005886 plasma membrane
GO:0008083 growth factor activity
GO:0005161 platelet-derived growth factor receptor binding
GO:0042803 protein homodimerization activity
GO:0007171 activation of transmembrane receptor protein tyrosine kinase activity
GO:0009887 animal organ morphogenesis
GO:0060348 bone development
GO:0071230 cellular response to amino acid stimulus
GO:0048565 digestive tract development
GO:0048568 embryonic organ development
GO:0048008 platelet-derived growth factor receptor signaling pathway
GO:0120162 positive regulation of cold-induced thermogenesis
GO:0048146 positive regulation of fibroblast proliferation
GO:0050730 regulation of peptidyl-tyrosine phosphorylation

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1015 Disulfide bond
KW-0339 Growth factor
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR000859 CUB_dom
IPR029034 Cystine-knot_cytokine
IPR029817 PDGF-C
IPR000072 PDGF/VEGF_dom
IPR035914 Sperma_CUB_dom_sf

PROSITE

PROSITE ID PROSITE Term
PS01180 CUB
PS50278 PDGF_2

Pfam

Pfam ID Pfam Term
PF00431 CUB
PF00341 PDGF