DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AETTS
Uniprot ID:
Q6PIF2
Source protein:
Synaptonemal complex central element protein 2
Source gene:
SYCE2
Class:
DEG_SPOP_SBC_1
Location:
199:203
E3 ligase:
SPOP
DEGRON score:
0.8896
ASA_SCORE:
72.64
COIL:
0.6128
CONS_SCORE:
0.2395
DSS_SCORE:
0.6113
HELIX:
0.1192
FCONS_SCORE:
1.0634
RIG_SCORE:
0.6849
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V195A
TCGA-AX-A06F
UCEC
TCGA
AETTS
DEG_SPOP_SBC_1
0.2222
p.V195A
DO41752
UCEC
ICGC
AETTS
DEG_SPOP_SBC_1
0.2222
p.V198M
TCGA-CG-5726
STAD
TCGA
AETTS
DEG_SPOP_SBC_1
0.3056
p.V198M
DO38483
STAD
ICGC
AETTS
DEG_SPOP_SBC_1
0.3056
p.D192E
DO228931
LICA
ICGC
AETTS
DEG_SPOP_SBC_1
0.1389
p.P190H
DO229029
LICA
ICGC
AETTS
DEG_SPOP_SBC_1
0.0833
p.Q211R
SIDM00041
Gastric Carcinoma
GDSC
AETTS
DEG_SPOP_SBC_1
0.1111
p.Q211R
ACH-002306
Gastric Cancer
CCLE
AETTS
DEG_SPOP_SBC_1
0.1111
p.Q211R
STS-0421
soft_tissue
COSMIC
AETTS
DEG_SPOP_SBC_1
0.1111
p.P191Q
SIDM00852
Glioma
GDSC
AETTS
DEG_SPOP_SBC_1
0.1111
p.P191Q
ACH-000389
Brain Cancer
CCLE
AETTS
DEG_SPOP_SBC_1
0.1111
p.P191Q
H4
central_nervous_system
COSMIC
AETTS
DEG_SPOP_SBC_1
0.1111
p.V193M
SIDM00150
Colorectal Carcinoma
GDSC
AETTS
DEG_SPOP_SBC_1
0.1667
p.V193M
ACH-000969
Colon/Colorectal Cancer
CCLE
AETTS
DEG_SPOP_SBC_1
0.1667
p.V193M
KM12
large_intestine
COSMIC
AETTS
DEG_SPOP_SBC_1
0.1667
p.N213K
ACH-000791
Lung Cancer
CCLE
AETTS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with SYCE2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AETTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6PIF2
Synaptonemal complex central element protein 2
DEG_SPOP_SBC_1
199:203
AETTS
SPOP
0.8896
More...
Q8NG31
Kinetochore scaffold 1
DEG_SPOP_SBC_1
1656:1660
AETTS
SPOP
0.9488
More...
Q92750
Transcription initiation factor TFIID subunit 4B
DEG_SPOP_SBC_1
138:142
AETTS
SPOP
0.9872
More...
Q96PE2
Rho guanine nucleotide exchange factor 17
DEG_SPOP_SBC_1
1677:1681
AETTS
SPOP
0.9496
More...