DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AETTS
Uniprot ID:
Q92750
Source protein:
Transcription initiation factor TFIID subunit 4B
Source gene:
TAF4B
Class:
DEG_SPOP_SBC_1
Location:
138:142
E3 ligase:
SPOP
DEGRON score:
0.9872
ASA_SCORE:
100.26
COIL:
0.9414
CONS_SCORE:
0.3795
DSS_SCORE:
0.5747
HELIX:
0.0318
FCONS_SCORE:
1.0024
RIG_SCORE:
0.7288
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R137I
TCGA-05-4424
LUAD
TCGA
AETTS
DEG_SPOP_SBC_1
0.3056
p.R137I
DO23672
LUAD
ICGC
AETTS
DEG_SPOP_SBC_1
0.3056
p.V150L
DO229038
LICA
ICGC
AETTS
DEG_SPOP_SBC_1
0.1111
p.P148T
DO229539
UTCA
ICGC
AETTS
DEG_SPOP_SBC_1
0.1667
p.A152T
SIDM01090
Colorectal Carcinoma
GDSC
AETTS
DEG_SPOP_SBC_1
0.0556
p.A152T
SIDM00969
Ovarian Carcinoma
GDSC
AETTS
DEG_SPOP_SBC_1
0.0556
p.A152T
SIDM00319
Melanoma
GDSC
AETTS
DEG_SPOP_SBC_1
0.0556
p.A152T
SIDM00971
Breast Carcinoma
GDSC
AETTS
DEG_SPOP_SBC_1
0.0556
p.A152T
SIDM00844
Burkitt's Lymphoma
GDSC
AETTS
DEG_SPOP_SBC_1
0.0556
p.A152T
SIDM01677
Non-Small Cell Lung Carcinoma
GDSC
AETTS
DEG_SPOP_SBC_1
0.0556
p.A152V
SIDM01090
Colorectal Carcinoma
GDSC
AETTS
DEG_SPOP_SBC_1
0.0556
p.A152V
SIDM00969
Ovarian Carcinoma
GDSC
AETTS
DEG_SPOP_SBC_1
0.0556
p.A152V
SIDM00319
Melanoma
GDSC
AETTS
DEG_SPOP_SBC_1
0.0556
p.A152V
SIDM00971
Breast Carcinoma
GDSC
AETTS
DEG_SPOP_SBC_1
0.0556
p.A152V
SIDM00844
Burkitt's Lymphoma
GDSC
AETTS
DEG_SPOP_SBC_1
0.0556
p.A152V
SIDM01677
Non-Small Cell Lung Carcinoma
GDSC
AETTS
DEG_SPOP_SBC_1
0.0556
p.S142R
SIDM00498
Colorectal Carcinoma
GDSC
AETTS
DEG_SPOP_SBC_1
0.7427
p.S142R
ACH-000970
Colon/Colorectal Cancer
CCLE
AETTS
DEG_SPOP_SBC_1
0.7427
p.S142R
SNU-C5
large_intestine
COSMIC
AETTS
DEG_SPOP_SBC_1
0.7427
p.I144M
SIDM00537
Colorectal Carcinoma
GDSC
AETTS
DEG_SPOP_SBC_1
0.2778
p.I144M
ACH-001345
Colon/Colorectal Cancer
CCLE
AETTS
DEG_SPOP_SBC_1
0.2778
p.I144M
GP5d
large_intestine
COSMIC
AETTS
DEG_SPOP_SBC_1
0.2778
Drug responses associated with TAF4B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AETTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6PIF2
Synaptonemal complex central element protein 2
DEG_SPOP_SBC_1
199:203
AETTS
SPOP
0.8896
More...
Q8NG31
Kinetochore scaffold 1
DEG_SPOP_SBC_1
1656:1660
AETTS
SPOP
0.9488
More...
Q92750
Transcription initiation factor TFIID subunit 4B
DEG_SPOP_SBC_1
138:142
AETTS
SPOP
0.9872
More...
Q96PE2
Rho guanine nucleotide exchange factor 17
DEG_SPOP_SBC_1
1677:1681
AETTS
SPOP
0.9496
More...