DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
AGTST
Uniprot ID:
A2IDD5
Source protein:
Coiled-coil domain-containing protein 78
Source gene:
CCDC78
Class:
DEG_SPOP_SBC_1
Location:
432:436
E3 ligase:
SPOP
DEGRON score:
0.8882
ASA_SCORE:
72.52
COIL:
0.797
CONS_SCORE:
0.6864
DSS_SCORE:
0.6702
HELIX:
0.0298
FCONS_SCORE:
1.0684
RIG_SCORE:
0.7333
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T426M
TCGA-AA-3947
COAD
TCGA
AGTST
DEG_SPOP_SBC_1
0.1667
p.T426M
DO8192
COAD
ICGC
AGTST
DEG_SPOP_SBC_1
0.1667
p.T436M
TCGA-AX-A1CE
UCEC
TCGA
AGTST
DEG_SPOP_SBC_1
0.7423
p.T436M
DO42280
UCEC
ICGC
AGTST
DEG_SPOP_SBC_1
0.7423
p.S435N
DO234350
ESAD
ICGC
AGTST
DEG_SPOP_SBC_1
0.7069
Drug responses associated with CCDC78 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AGTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A2IDD5
Coiled-coil domain-containing protein 78
DEG_SPOP_SBC_1
432:436
AGTST
SPOP
0.8882
More...
O75165
DnaJ homolog subfamily C member 13
DEG_SPOP_SBC_1
2218:2222
AGTST
SPOP
0.9952
More...
O96008
Mitochondrial import receptor subunit TOM40 homolog
DEG_SPOP_SBC_1
46:50
AGTST
SPOP
0.8387
More...
Q03164
Histone-lysine N-methyltransferase 2A
DEG_SPOP_SBC_1
3314:3318
AGTST
SPOP
0.9902
More...
A6NKL6
Transmembrane protein 200C
DEG_SPOP_SBC_1
543:547
AGTST
SPOP
0.9889
More...