DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
AGTST
Uniprot ID:
A6NKL6
Source protein:
Transmembrane protein 200C
Source gene:
TMEM200C
Class:
DEG_SPOP_SBC_1
Location:
543:547
E3 ligase:
SPOP
DEGRON score:
0.9889
ASA_SCORE:
65.42
COIL:
0.8564
CONS_SCORE:
0.5675
DSS_SCORE:
0.5831
HELIX:
0.0656
FCONS_SCORE:
1.1521
RIG_SCORE:
0.659
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q557E
TCGA-UB-A7MF
LIHC
TCGA
AGTST
DEG_SPOP_SBC_1
0.0556
p.Q557E
DO52322
LIHC
ICGC
AGTST
DEG_SPOP_SBC_1
0.0556
p.A553S
TCGA-Z6-A8JE
ESCA
TCGA
AGTST
DEG_SPOP_SBC_1
0.1667
p.A553S
ACH-001370
Ovarian Cancer
CCLE
AGTST
DEG_SPOP_SBC_1
0.1667
p.E548K
TCGA-ZX-AA5X
CESC
TCGA
AGTST
DEG_SPOP_SBC_1
0.3056
p.E548K
DO219762
CESC
ICGC
AGTST
DEG_SPOP_SBC_1
0.3056
p.S533R
DO222419
BTCA
ICGC
AGTST
DEG_SPOP_SBC_1
0.0556
p.R541W
DO233882
GACA
ICGC
AGTST
DEG_SPOP_SBC_1
0.2778
p.R541W
SIDM02039
Colorectal Carcinoma
GDSC
AGTST
DEG_SPOP_SBC_1
0.2778
p.A555D
DO229015
LICA
ICGC
AGTST
DEG_SPOP_SBC_1
0.1111
p.R541Q
DO222632
MELA
ICGC
AGTST
DEG_SPOP_SBC_1
0.2778
p.R541Q
SIDM01203
Other Solid Cancers
GDSC
AGTST
DEG_SPOP_SBC_1
0.2778
p.R541Q
ACH-002291
Embryonal Cancer
CCLE
AGTST
DEG_SPOP_SBC_1
0.2778
p.R541Q
NTERA-2_cl_D1
testis
COSMIC
AGTST
DEG_SPOP_SBC_1
0.2778
p.P539L
DO222837
MELA
ICGC
AGTST
DEG_SPOP_SBC_1
0.2222
p.S546C
SIDM01665
Colorectal Carcinoma
GDSC
AGTST
DEG_SPOP_SBC_1
0.7541
p.S546C
ACH-000089
Colon/Colorectal Cancer
CCLE
AGTST
DEG_SPOP_SBC_1
0.7541
Drug responses associated with TMEM200C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AGTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A2IDD5
Coiled-coil domain-containing protein 78
DEG_SPOP_SBC_1
432:436
AGTST
SPOP
0.8882
More...
O75165
DnaJ homolog subfamily C member 13
DEG_SPOP_SBC_1
2218:2222
AGTST
SPOP
0.9952
More...
O96008
Mitochondrial import receptor subunit TOM40 homolog
DEG_SPOP_SBC_1
46:50
AGTST
SPOP
0.8387
More...
Q03164
Histone-lysine N-methyltransferase 2A
DEG_SPOP_SBC_1
3314:3318
AGTST
SPOP
0.9902
More...
A6NKL6
Transmembrane protein 200C
DEG_SPOP_SBC_1
543:547
AGTST
SPOP
0.9889
More...