DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AITTS
Uniprot ID:
Q8TD26
Source protein:
Chromodomain-helicase-DNA-binding protein 6
Source gene:
CHD6
Class:
DEG_SPOP_SBC_1
Location:
2600:2604
E3 ligase:
SPOP
DEGRON score:
0.8616
ASA_SCORE:
71.22
COIL:
0.87
CONS_SCORE:
0.3701
DSS_SCORE:
0.5028
HELIX:
0.0668
FCONS_SCORE:
0.9914
RIG_SCORE:
0.6975
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P2592L
TCGA-BF-AAP7
SKCM
TCGA
AITTS
DEG_SPOP_SBC_1
0.1111
p.P2592L
DO219472
SKCM
ICGC
AITTS
DEG_SPOP_SBC_1
0.1111
p.P2592S
TCGA-BF-AAP7
SKCM
TCGA
AITTS
DEG_SPOP_SBC_1
0.1111
p.P2592S
DO219472
SKCM
ICGC
AITTS
DEG_SPOP_SBC_1
0.1111
p.P2590R
TCGA-DX-A6BA
SARC
TCGA
AITTS
DEG_SPOP_SBC_1
0.0556
p.P2590R
DO219995
SARC
ICGC
AITTS
DEG_SPOP_SBC_1
0.0556
p.S2594F
TCGA-EE-A3AE
SKCM
TCGA
AITTS
DEG_SPOP_SBC_1
0.1667
p.S2594F
DO37802
SKCM
ICGC
AITTS
DEG_SPOP_SBC_1
0.1667
p.L2613R
TCGA-EE-A3J4
SKCM
TCGA
AITTS
DEG_SPOP_SBC_1
0.0833
p.L2613R
DO48604
SKCM
ICGC
AITTS
DEG_SPOP_SBC_1
0.0833
p.P2599L
DO11854
GBM
ICGC
AITTS
DEG_SPOP_SBC_1
0.3056
p.T2603N
DO228952
LICA
ICGC
AITTS
DEG_SPOP_SBC_1
0.7055
p.S2604I
SIDM00282
Colorectal Carcinoma
GDSC
AITTS
DEG_SPOP_SBC_1
0.7341
p.P2599R
SIDM00225
Melanoma
GDSC
AITTS
DEG_SPOP_SBC_1
0.3056
p.P2599R
ACH-002143
Skin Cancer
CCLE
AITTS
DEG_SPOP_SBC_1
0.3056
p.P2599R
IST-MEL1
skin
COSMIC
AITTS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with CHD6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AITTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P15408
Fos-related antigen 2
DEG_SPOP_SBC_1
53:57
AITTS
SPOP
0.5293
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
1677:1681
AITTS
SPOP
0.7646
More...
Q8TD26
Chromodomain-helicase-DNA-binding protein 6
DEG_SPOP_SBC_1
2600:2604
AITTS
SPOP
0.8616
More...
Q9NSC2
Sal-like protein 1
DEG_SPOP_SBC_1
171:175
AITTS
SPOP
0.8729
More...