DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
AKENS
Uniprot ID:
Q9UHV9
Source protein:
Prefoldin subunit 2
Source gene:
PFDN2
Class:
DEG_APCC_KENBOX_2
Location:
135:139
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6125
ASA_SCORE:
105.48
COIL:
0.668
CONS_SCORE:
0.4793
DSS_SCORE:
0.6436
HELIX:
0.3256
FCONS_SCORE:
0.9073
RIG_SCORE:
0.6494
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R125H
TCGA-B5-A3FC
UCEC
TCGA
AKENS
DEG_APCC_KENBOX_2
0.0556
p.R125H
DO41871
UCEC
ICGC
AKENS
DEG_APCC_KENBOX_2
0.0556
p.E129K
TCGA-CR-6484
HNSC
TCGA
AKENS
DEG_APCC_KENBOX_2
0.1667
p.E129K
DO15206
HNSC
ICGC
AKENS
DEG_APCC_KENBOX_2
0.1667
p.G128R
TCGA-L7-A56G
ESCA
TCGA
AKENS
DEG_APCC_KENBOX_2
0.1389
p.R125C
TCGA-UY-A78L
BLCA
TCGA
AKENS
DEG_APCC_KENBOX_2
0.0556
p.R125C
DO219032
BLCA
ICGC
AKENS
DEG_APCC_KENBOX_2
0.0556
p.R125C
DO218840
SKCA
ICGC
AKENS
DEG_APCC_KENBOX_2
0.0556
p.A142D
DO229026
LICA
ICGC
AKENS
DEG_APCC_KENBOX_2
0.25
p.N138S
SIDM00704
Small Cell Lung Carcinoma
GDSC
AKENS
DEG_APCC_KENBOX_2
0.7069
Drug responses associated with PFDN2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AKENS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T5U3
Rho GTPase-activating protein 21
DEG_APCC_KENBOX_2
1474:1478
AKENS
APC,CDC20,FZR1
0.8676
More...
Q5T6F2
Ubiquitin-associated protein 2
DEG_APCC_KENBOX_2
110:114
AKENS
APC,CDC20,FZR1
0.6159
More...
Q9BXT5
Testis-expressed protein 15
DEG_APCC_KENBOX_2
484:488
AKENS
APC,CDC20,FZR1
0.9942
More...
Q9C0A6
Histone-lysine N-methyltransferase SETD5
DEG_APCC_KENBOX_2
1078:1082
AKENS
APC,CDC20,FZR1
0.5556
More...
Q9UHV9
Prefoldin subunit 2
DEG_APCC_KENBOX_2
135:139
AKENS
APC,CDC20,FZR1
0.6125
More...