DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ANSTT
Uniprot ID:
Q96T58
Source protein:
Msx2-interacting protein
Source gene:
SPEN
Class:
DEG_SPOP_SBC_1
Location:
1569:1573
E3 ligase:
SPOP
DEGRON score:
0.992
ASA_SCORE:
91.04
COIL:
0.9286
CONS_SCORE:
0.4618
DSS_SCORE:
0.5927
HELIX:
0.039
FCONS_SCORE:
1.2007
RIG_SCORE:
0.6337
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1571N
TCGA-06-5416
GBM
TCGA
ANSTT
DEG_SPOP_SBC_1
0.7069
p.S1571N
DO10880
GBM
ICGC
ANSTT
DEG_SPOP_SBC_1
0.7069
p.D1574N
TCGA-86-8056
LUAD
TCGA
ANSTT
DEG_SPOP_SBC_1
0.3056
p.D1574N
DO24950
LUAD
ICGC
ANSTT
DEG_SPOP_SBC_1
0.3056
p.L1582P
TCGA-B5-A3FA
UCEC
TCGA
ANSTT
DEG_SPOP_SBC_1
0.0833
p.L1582P
DO52402
UCEC
ICGC
ANSTT
DEG_SPOP_SBC_1
0.0833
p.E1578Q
TCGA-JW-A5VL
CESC
TCGA
ANSTT
DEG_SPOP_SBC_1
0.1944
p.E1578Q
DO49976
CESC
ICGC
ANSTT
DEG_SPOP_SBC_1
0.1944
p.E1567Q
ACH-000975
Lung Cancer
CCLE
ANSTT
DEG_SPOP_SBC_1
0.2778
Drug responses associated with SPEN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ANSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94876
Transmembrane and coiled-coil domains protein 1
DEG_SPOP_SBC_1
433:437
ANSTT
SPOP
0.6609
More...
Q15059
Bromodomain-containing protein 3
DEG_SPOP_SBC_1
540:544
ANSTT
SPOP
0.9782
More...
Q86TC9
Myopalladin
DEG_SPOP_SBC_1
547:551
ANSTT
SPOP
0.9532
More...
Q96T58
Msx2-interacting protein
DEG_SPOP_SBC_1
1569:1573
ANSTT
SPOP
0.992
More...
Q7Z2G1
Histone H2B type W-T
DEG_SPOP_SBC_1
50:54
ANSTT
SPOP
0.8915
More...