DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AWSSS
Uniprot ID:
Q3V6T2
Source protein:
Girdin
Source gene:
CCDC88A
Class:
DEG_SPOP_SBC_1
Location:
1634:1638
E3 ligase:
SPOP
DEGRON score:
0.9294
ASA_SCORE:
82.24
COIL:
0.8318
CONS_SCORE:
0.657
DSS_SCORE:
0.4394
HELIX:
0.136
FCONS_SCORE:
1.0385
RIG_SCORE:
0.6082
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q1643K
TCGA-28-1750
GBM
TCGA
AWSSS
DEG_SPOP_SBC_1
0.1944
p.Q1643K
DO10930
GBM
ICGC
AWSSS
DEG_SPOP_SBC_1
0.1944
p.Q1643R
TCGA-5M-AAT6
COAD
TCGA
AWSSS
DEG_SPOP_SBC_1
0.1944
p.Q1643R
DO223703
COAD
ICGC
AWSSS
DEG_SPOP_SBC_1
0.1944
p.H1631N
TCGA-78-7535
LUAD
TCGA
AWSSS
DEG_SPOP_SBC_1
0.25
p.H1631N
DO24860
LUAD
ICGC
AWSSS
DEG_SPOP_SBC_1
0.25
p.E1632D
TCGA-DU-6392
LGG
TCGA
AWSSS
DEG_SPOP_SBC_1
0.2778
p.E1632D
DO22237
LGG
ICGC
AWSSS
DEG_SPOP_SBC_1
0.2778
p.D1630G
TCGA-E6-A1LX
UCEC
TCGA
AWSSS
DEG_SPOP_SBC_1
0.2222
p.D1630G
DO41020
UCEC
ICGC
AWSSS
DEG_SPOP_SBC_1
0.2222
p.S1626G
TCGA-HE-7128
KIRP
TCGA
AWSSS
DEG_SPOP_SBC_1
0.1111
p.S1626G
DO20796
KIRP
ICGC
AWSSS
DEG_SPOP_SBC_1
0.1111
p.S1635Y
DO228974
LICA
ICGC
AWSSS
DEG_SPOP_SBC_1
0.712
p.D1630E
DO229018
LICA
ICGC
AWSSS
DEG_SPOP_SBC_1
0.2222
p.S1626R
DO229009
LICA
ICGC
AWSSS
DEG_SPOP_SBC_1
0.1111
p.S1640T
SIDM00615
Hepatocellular Carcinoma
GDSC
AWSSS
DEG_SPOP_SBC_1
0.2778
p.S1640T
JHH-6
liver
COSMIC
AWSSS
DEG_SPOP_SBC_1
0.2778
p.T1635I
ACH-000764
Gastric Cancer
CCLE
AWSSS
DEG_SPOP_SBC_1
0.7078
p.S1641T
JHH-6
liver
COSMIC
AWSSS
DEG_SPOP_SBC_1
0.25
Drug responses associated with CCDC88A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AWSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60504
Vinexin
DEG_SPOP_SBC_1
321:325
AWSSS
SPOP
0.8929
More...
Q3V6T2
Girdin
DEG_SPOP_SBC_1
1634:1638
AWSSS
SPOP
0.9294
More...
Q6ZN44
Netrin receptor UNC5A
DEG_SPOP_SBC_1
128:132
AWSSS
SPOP
0.6965
More...
Q9P212
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1
DEG_SPOP_SBC_1
1186:1190
AWSSS
SPOP
0.8674
More...