DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DKENT
Uniprot ID:
Q8WZA2
Source protein:
Rap guanine nucleotide exchange factor 4
Source gene:
RAPGEF4
Class:
DEG_APCC_KENBOX_2
Location:
176:180
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5031
ASA_SCORE:
111.44
COIL:
0.9262
CONS_SCORE:
0.2485
DSS_SCORE:
0.6229
HELIX:
0.0424
FCONS_SCORE:
0.9364
RIG_SCORE:
0.6867
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R190C
TCGA-B5-A1MR
UCEC
TCGA
DKENT
DEG_APCC_KENBOX_2
0.0556
p.R190C
TCGA-E6-A1LX
UCEC
TCGA
DKENT
DEG_APCC_KENBOX_2
0.0556
p.R190C
DO41020
UCEC
ICGC
DKENT
DEG_APCC_KENBOX_2
0.0556
p.R190C
DO41758
UCEC
ICGC
DKENT
DEG_APCC_KENBOX_2
0.0556
p.L189I
TCGA-BF-A1PU
SKCM
TCGA
DKENT
DEG_APCC_KENBOX_2
0.0833
p.L189I
DO50278
SKCM
ICGC
DKENT
DEG_APCC_KENBOX_2
0.0833
p.D172Y
TCGA-DD-A73F
LIHC
TCGA
DKENT
DEG_APCC_KENBOX_2
0.2222
p.G168S
TCGA-EE-A182
SKCM
TCGA
DKENT
DEG_APCC_KENBOX_2
0.1111
p.I183M
DO9876
COAD
ICGC
DKENT
DEG_APCC_KENBOX_2
0.25
p.R190L
DO229028
LICA
ICGC
DKENT
DEG_APCC_KENBOX_2
0.0556
p.V170L
DO229037
LICA
ICGC
DKENT
DEG_APCC_KENBOX_2
0.1667
p.E174D
DO25153
LUAD
ICGC
DKENT
DEG_APCC_KENBOX_2
0.2778
p.E174D
DO50075
UCEC
ICGC
DKENT
DEG_APCC_KENBOX_2
0.2778
p.I183S
DO46657
PAAD
ICGC
DKENT
DEG_APCC_KENBOX_2
0.25
p.S187F
DO229502
SKCA
ICGC
DKENT
DEG_APCC_KENBOX_2
0.1389
p.S187F
DO37639
SKCM
ICGC
DKENT
DEG_APCC_KENBOX_2
0.1389
p.S187F
SUP-HD1
haematopoietic_and_lymphoid_tissue
COSMIC
DKENT
DEG_APCC_KENBOX_2
0.1389
p.G166S
DO223907
SKCM
ICGC
DKENT
DEG_APCC_KENBOX_2
0.0556
p.R168M
DO41999
UCEC
ICGC
DKENT
DEG_APCC_KENBOX_2
0.1111
p.F175C
DO43907
UCEC
ICGC
DKENT
DEG_APCC_KENBOX_2
0.3056
p.V187I
SIDM00120
Prostate Carcinoma
GDSC
DKENT
DEG_APCC_KENBOX_2
0.1389
p.V187I
ACH-000979
Prostate Cancer
CCLE
DKENT
DEG_APCC_KENBOX_2
0.1389
p.V187I
DU-145
prostate
COSMIC
DKENT
DEG_APCC_KENBOX_2
0.1389
p.G168E
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
DKENT
DEG_APCC_KENBOX_2
0.1111
p.D170N
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
DKENT
DEG_APCC_KENBOX_2
0.1667
p.H188Y
COLO-792
skin
COSMIC
DKENT
DEG_APCC_KENBOX_2
0.1111
Drug responses associated with RAPGEF4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DKENT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P31350
Ribonucleoside-diphosphate reductase subunit M2
DEG_APCC_KENBOX_2
29:33
DKENT
APC,CDC20,FZR1
0.9969
More...
Q8WZA2
Rap guanine nucleotide exchange factor 4
DEG_APCC_KENBOX_2
176:180
DKENT
APC,CDC20,FZR1
0.5031
More...
Q96MA1
Doublesex- and mab-3-related transcription factor B1
DEG_APCC_KENBOX_2
316:320
DKENT
APC,CDC20,FZR1
0.7162
More...
Q92628
Uncharacterized protein KIAA0232
DEG_APCC_KENBOX_2
923:927
DKENT
APC,CDC20,FZR1
0.7191
More...