DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DKENV
Uniprot ID:
P21359
Source protein:
Neurofibromin
Source gene:
NF1
Class:
DEG_APCC_KENBOX_2
Location:
2795:2799
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8116
ASA_SCORE:
85.58
COIL:
0.686
CONS_SCORE:
0.2129
DSS_SCORE:
0.6563
HELIX:
0.2334
FCONS_SCORE:
1.0176
RIG_SCORE:
0.6781
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V2799I
TCGA-NF-A5CP
UCS
TCGA
DKENV
DEG_APCC_KENBOX_2
0.5965
p.A2786T
DO230336
COCA
ICGC
DKENV
DEG_APCC_KENBOX_2
0.0833
p.G2806C
DO228976
LICA
ICGC
DKENV
DEG_APCC_KENBOX_2
0.1389
p.P2803T
SIDM00584
Osteosarcoma
GDSC
DKENV
DEG_APCC_KENBOX_2
0.2222
p.P2803T
SIDM00281
Other Solid Cancers
GDSC
DKENV
DEG_APCC_KENBOX_2
0.2222
p.P2803T
SIDM00569
Osteosarcoma
GDSC
DKENV
DEG_APCC_KENBOX_2
0.2222
p.P2803T
ACH-002100
Skin Cancer
CCLE
DKENV
DEG_APCC_KENBOX_2
0.2222
p.P2803T
ACH-002142
Bone Cancer
CCLE
DKENV
DEG_APCC_KENBOX_2
0.2222
p.P2803T
ACH-002178
Bone Cancer
CCLE
DKENV
DEG_APCC_KENBOX_2
0.2222
p.P2803T
NY
bone
COSMIC
DKENV
DEG_APCC_KENBOX_2
0.2222
p.P2803T
DJM-1
skin
COSMIC
DKENV
DEG_APCC_KENBOX_2
0.2222
p.P2803T
HuO-3N1
bone
COSMIC
DKENV
DEG_APCC_KENBOX_2
0.2222
p.T2805I
ACH-000985
Colon/Colorectal Cancer
CCLE
DKENV
DEG_APCC_KENBOX_2
0.1667
Drug responses associated with NF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DKENV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43683
Mitotic checkpoint serine/threonine-protein kinase BUB1
DEG_APCC_KENBOX_2
624:628
DKENV
APC,CDC20,FZR1
0.9776
More...
P21359
Neurofibromin
DEG_APCC_KENBOX_2
2795:2799
DKENV
APC,CDC20,FZR1
0.8116
More...
Q8IUH5
Palmitoyltransferase ZDHHC17
DEG_APCC_KENBOX_2
87:91
DKENV
APC,CDC20,FZR1
0.5783
More...
Q9BY12
S phase cyclin A-associated protein in the endoplasmic reticulum
DEG_APCC_KENBOX_2
299:303
DKENV
APC,CDC20,FZR1
0.8406
More...
Q9NYZ3
G2 and S phase-expressed protein 1
DEG_APCC_KENBOX_2
709:713
DKENV
APC,CDC20,FZR1
0.9319
More...