DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DKENV
Uniprot ID:
Q9NYZ3
Source protein:
G2 and S phase-expressed protein 1
Source gene:
GTSE1
Class:
DEG_APCC_KENBOX_2
Location:
709:713
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9319
ASA_SCORE:
94.54
COIL:
0.851
CONS_SCORE:
0.6248
DSS_SCORE:
0.448
HELIX:
0.0864
FCONS_SCORE:
1.1333
RIG_SCORE:
0.7162
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A704T
TCGA-AY-6197
COAD
TCGA
DKENV
DEG_APCC_KENBOX_2
0.1944
p.A704T
DO9956
COAD
ICGC
DKENV
DEG_APCC_KENBOX_2
0.1944
p.P708L
TCGA-D3-A2JN
SKCM
TCGA
DKENV
DEG_APCC_KENBOX_2
0.3056
p.P708L
DO47590
SKCM
ICGC
DKENV
DEG_APCC_KENBOX_2
0.3056
p.S717I
TCGA-X6-A7WA
SARC
TCGA
DKENV
DEG_APCC_KENBOX_2
0.2222
p.S717I
DO220312
SARC
ICGC
DKENV
DEG_APCC_KENBOX_2
0.2222
p.L723V
DO229505
LAML
ICGC
DKENV
DEG_APCC_KENBOX_2
0.0556
p.L723V
SIDM00961
Ewing's Sarcoma
GDSC
DKENV
DEG_APCC_KENBOX_2
0.0556
p.L723V
SIDM00353
Other Sarcomas
GDSC
DKENV
DEG_APCC_KENBOX_2
0.0556
p.L723V
SIDM00570
Gastric Carcinoma
GDSC
DKENV
DEG_APCC_KENBOX_2
0.0556
p.L723V
SIDM00569
Osteosarcoma
GDSC
DKENV
DEG_APCC_KENBOX_2
0.0556
p.L723V
SIDM01181
Hepatocellular Carcinoma
GDSC
DKENV
DEG_APCC_KENBOX_2
0.0556
p.L723V
SIDM00397
Acute Myeloid Leukemia
GDSC
DKENV
DEG_APCC_KENBOX_2
0.0556
p.L723V
SIDM00448
B-Cell Non-Hodgkin's Lymphoma
GDSC
DKENV
DEG_APCC_KENBOX_2
0.0556
Drug responses associated with GTSE1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DKENV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43683
Mitotic checkpoint serine/threonine-protein kinase BUB1
DEG_APCC_KENBOX_2
624:628
DKENV
APC,CDC20,FZR1
0.9776
More...
P21359
Neurofibromin
DEG_APCC_KENBOX_2
2795:2799
DKENV
APC,CDC20,FZR1
0.8116
More...
Q8IUH5
Palmitoyltransferase ZDHHC17
DEG_APCC_KENBOX_2
87:91
DKENV
APC,CDC20,FZR1
0.5783
More...
Q9BY12
S phase cyclin A-associated protein in the endoplasmic reticulum
DEG_APCC_KENBOX_2
299:303
DKENV
APC,CDC20,FZR1
0.8406
More...
Q9NYZ3
G2 and S phase-expressed protein 1
DEG_APCC_KENBOX_2
709:713
DKENV
APC,CDC20,FZR1
0.9319
More...