DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
DSGHDS
Uniprot ID:
Q7Z4K8
Source protein:
Tripartite motif-containing protein 46
Source gene:
TRIM46
Class:
DEG_SCF_TRCP1_1
Location:
633:638
E3 ligase:
BTRC
DEGRON score:
0.809
ASA_SCORE:
50.2667
COIL:
0.8138
CONS_SCORE:
0.6028
DSS_SCORE:
0.6543
HELIX:
0.114
FCONS_SCORE:
1.4937
RIG_SCORE:
0.5761
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G635R
TCGA-A8-A07C
BRCA
TCGA
DSGHDS
DEG_SCF_TRCP1_1
0.7568
p.G635R
DO4713
BRCA
ICGC
DSGHDS
DEG_SCF_TRCP1_1
0.7568
p.A640V
TCGA-AP-A0LM
UCEC
TCGA
DSGHDS
DEG_SCF_TRCP1_1
0.2778
p.A640V
DO43306
UCEC
ICGC
DSGHDS
DEG_SCF_TRCP1_1
0.2778
p.A640V
SIDM00151
Ovarian Carcinoma
GDSC
DSGHDS
DEG_SCF_TRCP1_1
0.2778
p.A640V
ACH-000966
Ovarian Cancer
CCLE
DSGHDS
DEG_SCF_TRCP1_1
0.2778
p.A640V
IGROV-1
ovary
COSMIC
DSGHDS
DEG_SCF_TRCP1_1
0.2778
p.S648L
TCGA-AZ-4315
COAD
TCGA
DSGHDS
DEG_SCF_TRCP1_1
0.0556
p.S648L
DO8842
COAD
ICGC
DSGHDS
DEG_SCF_TRCP1_1
0.0556
p.G635W
TCGA-BH-A18G
BRCA
TCGA
DSGHDS
DEG_SCF_TRCP1_1
0.7825
p.G635W
DO3686
BRCA
ICGC
DSGHDS
DEG_SCF_TRCP1_1
0.7825
p.D624N
TCGA-BK-A6W3
UCEC
TCGA
DSGHDS
DEG_SCF_TRCP1_1
0.0833
p.D624N
DO50076
UCEC
ICGC
DSGHDS
DEG_SCF_TRCP1_1
0.0833
p.I626L
TCGA-CA-6718
COAD
TCGA
DSGHDS
DEG_SCF_TRCP1_1
0.1389
p.I626L
DO7801
COAD
ICGC
DSGHDS
DEG_SCF_TRCP1_1
0.1389
p.P628L
TCGA-DA-A1IC
SKCM
TCGA
DSGHDS
DEG_SCF_TRCP1_1
0.1944
p.P628L
DO37430
SKCM
ICGC
DSGHDS
DEG_SCF_TRCP1_1
0.1944
p.P628L
SIDM01628
Non-Small Cell Lung Carcinoma
GDSC
DSGHDS
DEG_SCF_TRCP1_1
0.1944
p.P628L
ACH-000851
Lung Cancer
CCLE
DSGHDS
DEG_SCF_TRCP1_1
0.1944
p.A643V
TCGA-EB-A5SE
SKCM
TCGA
DSGHDS
DEG_SCF_TRCP1_1
0.1944
p.A643V
DO47295
SKCM
ICGC
DSGHDS
DEG_SCF_TRCP1_1
0.1944
p.A647V
TCGA-F5-6814
READ
TCGA
DSGHDS
DEG_SCF_TRCP1_1
0.0833
p.A647V
TCGA-XK-AAIW
PRAD
TCGA
DSGHDS
DEG_SCF_TRCP1_1
0.0833
p.A647V
DO51407
PRAD
ICGC
DSGHDS
DEG_SCF_TRCP1_1
0.0833
p.A647V
DO36556
READ
ICGC
DSGHDS
DEG_SCF_TRCP1_1
0.0833
p.P632L
TCGA-GS-A9TZ
DLBC
TCGA
DSGHDS
DEG_SCF_TRCP1_1
0.3056
p.P632L
DO219918
DLBC
ICGC
DSGHDS
DEG_SCF_TRCP1_1
0.3056
p.W639C
DO44096
COAD
ICGC
DSGHDS
DEG_SCF_TRCP1_1
0.3056
p.G639S
DO233864
GACA
ICGC
DSGHDS
DEG_SCF_TRCP1_1
0.3056
p.V645L
DO229045
LICA
ICGC
DSGHDS
DEG_SCF_TRCP1_1
0.1389
p.R635K
DO222363
MELA
ICGC
DSGHDS
DEG_SCF_TRCP1_1
0.7237
p.S633F
DO222557
MELA
ICGC
DSGHDS
DEG_SCF_TRCP1_1
0.7982
p.E641K
SIDM01943
Colorectal Carcinoma
GDSC
DSGHDS
DEG_SCF_TRCP1_1
0.25
p.R629G
LoVo
large_intestine
COSMIC
DSGHDS
DEG_SCF_TRCP1_1
0.2222
p.A627V
IGROV-1
ovary
COSMIC
DSGHDS
DEG_SCF_TRCP1_1
0.6111
Drug responses associated with TRIM46 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGHDS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q495M9
Usher syndrome type-1G protein
DEG_SCF_TRCP1_1
300:305
DSGHDS
BTRC
0.9169
More...
Q7Z4K8
Tripartite motif-containing protein 46
DEG_SCF_TRCP1_1
633:638
DSGHDS
BTRC
0.809
More...
Q9NQ86
E3 ubiquitin-protein ligase TRIM36
DEG_SCF_TRCP1_1
615:620
DSGHDS
BTRC
0.8094
More...
Q9ULI4
Kinesin-like protein KIF26A
DEG_SCF_TRCP1_1
1589:1594
DSGHDS
BTRC
0.9927
More...