DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGRGS
Uniprot ID:
Q9Y4G8
Source protein:
Rap guanine nucleotide exchange factor 2
Source gene:
RAPGEF2
Class:
DEG_SCF_TRCP1_1
Location:
1243:1248
E3 ligase:
BTRC
DEGRON score:
0.9965
ASA_SCORE:
59.85
COIL:
0.8975
CONS_SCORE:
0.3649
DSS_SCORE:
0.5162
HELIX:
0.0558
FCONS_SCORE:
1.04
RIG_SCORE:
0.5842
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1242S
TCGA-24-2295
OV
TCGA
DSGRGS
DEG_SCF_TRCP1_1
0.3056
p.A1242S
DO32173
OV
ICGC
DSGRGS
DEG_SCF_TRCP1_1
0.3056
p.C1252S
TCGA-44-A4SS
LUAD
TCGA
DSGRGS
DEG_SCF_TRCP1_1
0.2222
p.C1252S
DO24227
LUAD
ICGC
DSGRGS
DEG_SCF_TRCP1_1
0.2222
p.S1244I
TCGA-55-A491
LUAD
TCGA
DSGRGS
DEG_SCF_TRCP1_1
0.8453
p.S1244I
DO25787
LUAD
ICGC
DSGRGS
DEG_SCF_TRCP1_1
0.8453
p.G1245C
TCGA-55-A491
LUAD
TCGA
DSGRGS
DEG_SCF_TRCP1_1
0.76
p.G1245C
DO25787
LUAD
ICGC
DSGRGS
DEG_SCF_TRCP1_1
0.76
p.D1240H
TCGA-75-6214
LUAD
TCGA
DSGRGS
DEG_SCF_TRCP1_1
0.25
p.D1240H
DO24830
LUAD
ICGC
DSGRGS
DEG_SCF_TRCP1_1
0.25
p.R1236C
TCGA-90-A4ED
LUSC
TCGA
DSGRGS
DEG_SCF_TRCP1_1
0.1389
p.R1236C
TCGA-EE-A2MR
SKCM
TCGA
DSGRGS
DEG_SCF_TRCP1_1
0.1389
p.R1236C
TCGA-FW-A3R5
SKCM
TCGA
DSGRGS
DEG_SCF_TRCP1_1
0.1389
p.R1236C
TCGA-G4-6586
COAD
TCGA
DSGRGS
DEG_SCF_TRCP1_1
0.1389
p.R1236C
DO9698
COAD
ICGC
DSGRGS
DEG_SCF_TRCP1_1
0.1389
p.R1236C
DO45482
LUSC
ICGC
DSGRGS
DEG_SCF_TRCP1_1
0.1389
p.R1236C
DO37819
SKCM
ICGC
DSGRGS
DEG_SCF_TRCP1_1
0.1389
p.R1236C
DO37406
SKCM
ICGC
DSGRGS
DEG_SCF_TRCP1_1
0.1389
p.R1236C
SIDM00487
Colorectal Carcinoma
GDSC
DSGRGS
DEG_SCF_TRCP1_1
0.1389
p.R1236C
ACH-000963
Colon/Colorectal Cancer
CCLE
DSGRGS
DEG_SCF_TRCP1_1
0.1389
p.R1236C
CCK-81
large_intestine
COSMIC
DSGRGS
DEG_SCF_TRCP1_1
0.1389
p.A1237T
TCGA-AA-3864
COAD
TCGA
DSGRGS
DEG_SCF_TRCP1_1
0.1667
p.A1237T
DO8490
COAD
ICGC
DSGRGS
DEG_SCF_TRCP1_1
0.1667
p.A1237T
SIDM00216
Colorectal Carcinoma
GDSC
DSGRGS
DEG_SCF_TRCP1_1
0.1667
p.A1237T
ACH-000989
Colon/Colorectal Cancer
CCLE
DSGRGS
DEG_SCF_TRCP1_1
0.1667
p.A1237T
SNU-175
large_intestine
COSMIC
DSGRGS
DEG_SCF_TRCP1_1
0.1667
p.D1258A
TCGA-AX-A0J0
UCEC
TCGA
DSGRGS
DEG_SCF_TRCP1_1
0.0556
p.D1258A
DO41133
UCEC
ICGC
DSGRGS
DEG_SCF_TRCP1_1
0.0556
p.R1246S
TCGA-NH-A5IV
COAD
TCGA
DSGRGS
DEG_SCF_TRCP1_1
0.6316
p.R1246S
DO49095
COAD
ICGC
DSGRGS
DEG_SCF_TRCP1_1
0.6316
p.A1237V
DO230326
COCA
ICGC
DSGRGS
DEG_SCF_TRCP1_1
0.1667
p.R1236L
DO229045
LICA
ICGC
DSGRGS
DEG_SCF_TRCP1_1
0.1389
p.R1246C
SIDM00472
Ovarian Carcinoma
GDSC
DSGRGS
DEG_SCF_TRCP1_1
0.719
p.R1246C
ACH-001630
Ovarian Cancer
CCLE
DSGRGS
DEG_SCF_TRCP1_1
0.719
p.R1246C
PEO1
ovary
COSMIC
DSGRGS
DEG_SCF_TRCP1_1
0.719
Drug responses associated with RAPGEF2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGRGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P16471
Prolactin receptor
DEG_SCF_TRCP1_1
348:353
DSGRGS
BTRC
0.9988
More...
Q8TEU7
Rap guanine nucleotide exchange factor 6
DEG_SCF_TRCP1_1
1359:1364
DSGRGS
BTRC
0.9746
More...
Q9Y4G8
Rap guanine nucleotide exchange factor 2
DEG_SCF_TRCP1_1
1243:1248
DSGRGS
BTRC
0.9965
More...
Q8N398
von Willebrand factor A domain-containing protein 5B2
DEG_SCF_TRCP1_1
1141:1146
DSGRGS
BTRC
0.7446
More...