DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EKENR
Uniprot ID:
O60237
Source protein:
Protein phosphatase 1 regulatory subunit 12B
Source gene:
PPP1R12B
Class:
DEG_APCC_KENBOX_2
Location:
510:514
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6136
ASA_SCORE:
114.1
COIL:
0.3
CONS_SCORE:
0.3927
DSS_SCORE:
0.4573
HELIX:
0.6982
FCONS_SCORE:
0.9851
RIG_SCORE:
0.7255
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V518G
TCGA-EE-A3AF
SKCM
TCGA
EKENR
DEG_APCC_KENBOX_2
0.2222
p.V518G
DO37911
SKCM
ICGC
EKENR
DEG_APCC_KENBOX_2
0.2222
p.R500L
TCGA-HJ-7597
STAD
TCGA
EKENR
DEG_APCC_KENBOX_2
0.0556
p.R500L
DO38195
STAD
ICGC
EKENR
DEG_APCC_KENBOX_2
0.0556
p.N513H
DO7801
COAD
ICGC
EKENR
DEG_APCC_KENBOX_2
0.7423
p.F502S
DO14518
HNSC
ICGC
EKENR
DEG_APCC_KENBOX_2
0.1111
p.F502S
SIDM00661
B-Cell Non-Hodgkin's Lymphoma
GDSC
EKENR
DEG_APCC_KENBOX_2
0.1111
p.F502S
SIDM00781
Colorectal Carcinoma
GDSC
EKENR
DEG_APCC_KENBOX_2
0.1111
p.F502S
HT
haematopoietic_and_lymphoid_tissue
COSMIC
EKENR
DEG_APCC_KENBOX_2
0.1111
p.E504K
DO222810
MELA
ICGC
EKENR
DEG_APCC_KENBOX_2
0.6111
p.F500L
DO222837
MELA
ICGC
EKENR
DEG_APCC_KENBOX_2
0.0556
p.N505H
DO36394
READ
ICGC
EKENR
DEG_APCC_KENBOX_2
0.1944
p.S506L
DO38123
SKCM
ICGC
EKENR
DEG_APCC_KENBOX_2
0.6667
p.I507V
SIDM00746
Non-Small Cell Lung Carcinoma
GDSC
EKENR
DEG_APCC_KENBOX_2
0.25
Drug responses associated with PPP1R12B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EKENR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60237
Protein phosphatase 1 regulatory subunit 12B
DEG_APCC_KENBOX_2
510:514
EKENR
APC,CDC20,FZR1
0.6136
More...
O75116
Rho-associated protein kinase 2
DEG_APCC_KENBOX_2
1060:1064
EKENR
APC,CDC20,FZR1
0.9504
More...
Q6P444
Mitochondrial fission regulator 2
DEG_APCC_KENBOX_2
330:334
EKENR
APC,CDC20,FZR1
0.9887
More...
Q8NBI3
Draxin
DEG_APCC_KENBOX_2
121:125
EKENR
APC,CDC20,FZR1
0.7139
More...