DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EKENS
Uniprot ID:
Q2NKX8
Source protein:
DNA excision repair protein ERCC-6-like
Source gene:
ERCC6L
Class:
DEG_APCC_KENBOX_2
Location:
976:980
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9554
ASA_SCORE:
103.26
COIL:
0.5472
CONS_SCORE:
0.2407
DSS_SCORE:
0.4568
HELIX:
0.4338
FCONS_SCORE:
0.9803
RIG_SCORE:
0.7251
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N987S
TCGA-19-5951
GBM
TCGA
EKENS
DEG_APCC_KENBOX_2
0.1389
p.N987S
DO14067
GBM
ICGC
EKENS
DEG_APCC_KENBOX_2
0.1389
p.E976D
TCGA-A2-A0EY
BRCA
TCGA
EKENS
DEG_APCC_KENBOX_2
0.5647
p.E976D
DO3614
BRCA
ICGC
EKENS
DEG_APCC_KENBOX_2
0.5647
p.E976D
SIDM01105
Melanoma
GDSC
EKENS
DEG_APCC_KENBOX_2
0.5647
p.E976D
SK-MEL-3
skin
COSMIC
EKENS
DEG_APCC_KENBOX_2
0.5647
p.N966K
TCGA-BR-8372
STAD
TCGA
EKENS
DEG_APCC_KENBOX_2
0.0556
p.N966K
DO47873
STAD
ICGC
EKENS
DEG_APCC_KENBOX_2
0.0556
p.P986R
TCGA-CR-7379
HNSC
TCGA
EKENS
DEG_APCC_KENBOX_2
0.1667
p.P986R
DO14174
HNSC
ICGC
EKENS
DEG_APCC_KENBOX_2
0.1667
p.V975G
TCGA-D5-6533
COAD
TCGA
EKENS
DEG_APCC_KENBOX_2
0.3056
p.V975G
DO8280
COAD
ICGC
EKENS
DEG_APCC_KENBOX_2
0.3056
p.S969N
TCGA-DU-6407
LGG
TCGA
EKENS
DEG_APCC_KENBOX_2
0.5833
p.S969N
DO22295
LGG
ICGC
EKENS
DEG_APCC_KENBOX_2
0.5833
p.S988C
DO225363
BRCA
ICGC
EKENS
DEG_APCC_KENBOX_2
0.5556
p.E978Q
SIDM00457
Plasma Cell Myeloma
GDSC
EKENS
DEG_APCC_KENBOX_2
0.6744
p.E978Q
ACH-000057
Myeloma
CCLE
EKENS
DEG_APCC_KENBOX_2
0.6744
p.E978Q
OPM-2
haematopoietic_and_lymphoid_tissue
COSMIC
EKENS
DEG_APCC_KENBOX_2
0.6744
p.S966C
ACH-000711
Breast Cancer
CCLE
EKENS
DEG_APCC_KENBOX_2
0.0556
p.S966C
JIMT-1
breast
COSMIC
EKENS
DEG_APCC_KENBOX_2
0.0556
p.R990I
ACH-000993
Endometrial/Uterine Cancer
CCLE
EKENS
DEG_APCC_KENBOX_2
0.0556
p.R968K
ACH-001081
Colon/Colorectal Cancer
CCLE
EKENS
DEG_APCC_KENBOX_2
0.5556
p.R968K
HCC2998
large_intestine
COSMIC
EKENS
DEG_APCC_KENBOX_2
0.5556
Drug responses associated with ERCC6L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EKENS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15014
Zinc finger protein 609
DEG_APCC_KENBOX_2
159:163
EKENS
APC,CDC20,FZR1
0.903
More...
Q13426
DNA repair protein XRCC4
DEG_APCC_KENBOX_2
295:299
EKENS
APC,CDC20,FZR1
0.9752
More...
Q2NKX8
DNA excision repair protein ERCC-6-like
DEG_APCC_KENBOX_2
976:980
EKENS
APC,CDC20,FZR1
0.9554
More...
Q96L73
Histone-lysine N-methyltransferase, H3 lysine-36 specific
DEG_APCC_KENBOX_2
1179:1183
EKENS
APC,CDC20,FZR1
0.8074
More...
Q96T88
E3 ubiquitin-protein ligase UHRF1
DEG_APCC_KENBOX_2
621:625
EKENS
APC,CDC20,FZR1
0.766
More...