DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
EKENS
Uniprot ID:
Q96L73
Source protein:
Histone-lysine N-methyltransferase, H3 lysine-36 specific
Source gene:
NSD1
Class:
DEG_APCC_KENBOX_2
Location:
1179:1183
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8074
ASA_SCORE:
103.32
COIL:
0.4976
CONS_SCORE:
0.327
DSS_SCORE:
0.4713
HELIX:
0.4762
FCONS_SCORE:
1.0297
RIG_SCORE:
0.7008
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.C1185F
TCGA-17-Z016
LUAD
TCGA
EKENS
DEG_APCC_KENBOX_2
0.2778
p.C1185F
TCGA-S9-A6WG
LGG
TCGA
EKENS
DEG_APCC_KENBOX_2
0.2778
p.E1181V
TCGA-55-7994
LUAD
TCGA
EKENS
DEG_APCC_KENBOX_2
0.7693
p.R1173C
TCGA-AN-A046
BRCA
TCGA
EKENS
DEG_APCC_KENBOX_2
0.1667
p.M1174I
TCGA-EK-A2PG
CESC
TCGA
EKENS
DEG_APCC_KENBOX_2
0.1944
p.E1179D
TCGA-F5-6814
READ
TCGA
EKENS
DEG_APCC_KENBOX_2
0.5647
p.A1181V
DO230347
COCA
ICGC
EKENS
DEG_APCC_KENBOX_2
0.6936
p.A1181V
DO40996
UCEC
ICGC
EKENS
DEG_APCC_KENBOX_2
0.6936
p.G1175V
DO228986
LICA
ICGC
EKENS
DEG_APCC_KENBOX_2
0.2222
p.E1173D
DO229026
LICA
ICGC
EKENS
DEG_APCC_KENBOX_2
0.1667
p.G1191V
DO45321
LUAD
ICGC
EKENS
DEG_APCC_KENBOX_2
0.1111
p.D1187Y
DO47769
STAD
ICGC
EKENS
DEG_APCC_KENBOX_2
0.2222
p.P1170L
SIDM01092
B-Cell Non-Hodgkin's Lymphoma
GDSC
EKENS
DEG_APCC_KENBOX_2
0.0833
p.P1170L
ACH-002301
Lymphoma
CCLE
EKENS
DEG_APCC_KENBOX_2
0.0833
p.P1170L
RF-48
stomach
COSMIC
EKENS
DEG_APCC_KENBOX_2
0.0833
p.R1188S
SIDM00856
Other Solid Cancers
GDSC
EKENS
DEG_APCC_KENBOX_2
0.1944
p.R1188S
SIDM01775
B-Cell Non-Hodgkin's Lymphoma
GDSC
EKENS
DEG_APCC_KENBOX_2
0.1944
p.N1174S
DMS-53
lung
COSMIC
EKENS
DEG_APCC_KENBOX_2
0.1944
Drug responses associated with NSD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of EKENS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15014
Zinc finger protein 609
DEG_APCC_KENBOX_2
159:163
EKENS
APC,CDC20,FZR1
0.903
More...
Q13426
DNA repair protein XRCC4
DEG_APCC_KENBOX_2
295:299
EKENS
APC,CDC20,FZR1
0.9752
More...
Q2NKX8
DNA excision repair protein ERCC-6-like
DEG_APCC_KENBOX_2
976:980
EKENS
APC,CDC20,FZR1
0.9554
More...
Q96L73
Histone-lysine N-methyltransferase, H3 lysine-36 specific
DEG_APCC_KENBOX_2
1179:1183
EKENS
APC,CDC20,FZR1
0.8074
More...
Q96T88
E3 ubiquitin-protein ligase UHRF1
DEG_APCC_KENBOX_2
621:625
EKENS
APC,CDC20,FZR1
0.766
More...