DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KKENL
Uniprot ID:
Q6ZP01
Source protein:
RNA-binding protein 44
Source gene:
RBM44
Class:
DEG_APCC_KENBOX_2
Location:
32:36
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7572
ASA_SCORE:
89.54
COIL:
0.512
CONS_SCORE:
0.5338
DSS_SCORE:
0.6247
HELIX:
0.2626
FCONS_SCORE:
1.158
RIG_SCORE:
0.7229
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G42S
TCGA-C8-A1HM
BRCA
TCGA
KKENL
DEG_APCC_KENBOX_2
0.1667
p.G42S
DO3904
BRCA
ICGC
KKENL
DEG_APCC_KENBOX_2
0.1667
p.K32N
TCGA-D1-A16X
UCEC
TCGA
KKENL
DEG_APCC_KENBOX_2
0.5806
p.K32N
DO41799
UCEC
ICGC
KKENL
DEG_APCC_KENBOX_2
0.5806
p.S40Y
TCGA-D3-A3CB
SKCM
TCGA
KKENL
DEG_APCC_KENBOX_2
0.2222
p.S40Y
DO47386
SKCM
ICGC
KKENL
DEG_APCC_KENBOX_2
0.2222
p.L36V
TCGA-EO-A22X
UCEC
TCGA
KKENL
DEG_APCC_KENBOX_2
0.5654
p.L36V
DO43907
UCEC
ICGC
KKENL
DEG_APCC_KENBOX_2
0.5654
p.C43F
DO228985
LICA
ICGC
KKENL
DEG_APCC_KENBOX_2
0.1389
p.S39F
DO222702
MELA
ICGC
KKENL
DEG_APCC_KENBOX_2
0.25
p.N30T
SIDM00118
Colorectal Carcinoma
GDSC
KKENL
DEG_APCC_KENBOX_2
0.2778
p.N30T
ACH-001081
Colon/Colorectal Cancer
CCLE
KKENL
DEG_APCC_KENBOX_2
0.2778
p.N30T
HCC2998
large_intestine
COSMIC
KKENL
DEG_APCC_KENBOX_2
0.2778
p.L23P
SF268
central_nervous_system
COSMIC
KKENL
DEG_APCC_KENBOX_2
0.0833
Drug responses associated with RBM44 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KKENL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T0W9
Protein FAM83B
DEG_APCC_KENBOX_2
785:789
KKENL
APC,CDC20,FZR1
0.9502
More...
Q9Y4F3
Meiosis regulator and mRNA stability factor 1
DEG_APCC_KENBOX_2
704:708
KKENL
APC,CDC20,FZR1
0.9956
More...
Q6ZP01
RNA-binding protein 44
DEG_APCC_KENBOX_2
32:36
KKENL
APC,CDC20,FZR1
0.7572
More...
Q8N9V7
Protein TOPAZ1
DEG_APCC_KENBOX_2
261:265
KKENL
APC,CDC20,FZR1
0.8711
More...