DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KPTAYVRPM
Uniprot ID:
Q9UHB7
Source protein:
AF4/FMR2 family member 4
Source gene:
AFF4
Class:
DEG_SIAH_1
Location:
252:260
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9885
ASA_SCORE:
103.6667
COIL:
0.9517
CONS_SCORE:
0.5497
DSS_SCORE:
0.6622
HELIX:
0.0216
FCONS_SCORE:
0.9891
RIG_SCORE:
0.7078
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T254I
TCGA-43-6771
LUSC
TCGA
KPTAYVRPM
DEG_SIAH_1
0.5966
p.T254I
DO26443
LUSC
ICGC
KPTAYVRPM
DEG_SIAH_1
0.5966
p.E264K
TCGA-75-6207
LUAD
TCGA
KPTAYVRPM
DEG_SIAH_1
0.2222
p.E264K
DO26190
LUAD
ICGC
KPTAYVRPM
DEG_SIAH_1
0.2222
p.R258W
TCGA-AR-A0TZ
BRCA
TCGA
KPTAYVRPM
DEG_SIAH_1
0.7523
p.R258W
DO2287
BRCA
ICGC
KPTAYVRPM
DEG_SIAH_1
0.7523
p.R258W
DO232761
PBCA
ICGC
KPTAYVRPM
DEG_SIAH_1
0.7523
p.R258W
DO232593
PBCA
ICGC
KPTAYVRPM
DEG_SIAH_1
0.7523
p.G262R
TCGA-CV-7413
HNSC
TCGA
KPTAYVRPM
DEG_SIAH_1
0.2778
p.G262R
DO15567
HNSC
ICGC
KPTAYVRPM
DEG_SIAH_1
0.2778
p.G262R
SIDM02072
Colorectal Carcinoma
GDSC
KPTAYVRPM
DEG_SIAH_1
0.2778
p.M249V
TCGA-F4-6463
COAD
TCGA
KPTAYVRPM
DEG_SIAH_1
0.25
p.M249V
DO7958
COAD
ICGC
KPTAYVRPM
DEG_SIAH_1
0.25
Drug responses associated with AFF4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KPTAYVRPM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P51816
AF4/FMR2 family member 2
DEG_SIAH_1
284:292
KPTAYVRPM
SIAH1,SIAH2,SIAH3
0.9759
More...
P51825
AF4/FMR2 family member 1
DEG_SIAH_1
289:297
KPTAYVRPM
SIAH1,SIAH2,SIAH3
0.9757
More...
P51826
AF4/FMR2 family member 3
DEG_SIAH_1
230:238
KPTAYVRPM
SIAH1,SIAH2,SIAH3
0.96
More...
Q9UHB7
AF4/FMR2 family member 4
DEG_SIAH_1
252:260
KPTAYVRPM
SIAH1,SIAH2,SIAH3
0.9885
More...