DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
LGPHLD
Uniprot ID:
Q5VVP1
Source protein:
Spermatogenesis-associated protein 31A6
Source gene:
SPATA31A6
Class:
LIG_APCC_ABBA_1
Location:
105:110
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.994
ASA_SCORE:
79
COIL:
0.8613
CONS_SCORE:
0.4053
DSS_SCORE:
0.5696
HELIX:
0.0902
FCONS_SCORE:
1.1731
RIG_SCORE:
0.6705
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S95L
TCGA-32-4210
GBM
TCGA
LGPHLD
LIG_APCC_ABBA_1
0.0556
p.S95L
TCGA-74-6581
GBM
TCGA
LGPHLD
LIG_APCC_ABBA_1
0.0556
p.S95L
TCGA-EE-A2MD
SKCM
TCGA
LGPHLD
LIG_APCC_ABBA_1
0.0556
p.S95L
DO11645
GBM
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.0556
p.S95L
DO11531
GBM
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.0556
p.S95L
DO222434
MELA
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.0556
p.S95L
DO37851
SKCM
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.0556
p.L98R
TCGA-AJ-A3EK
UCEC
TCGA
LGPHLD
LIG_APCC_ABBA_1
0.1389
p.L98R
DO41584
UCEC
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.1389
p.P107S
TCGA-AM-5821
COAD
TCGA
LGPHLD
LIG_APCC_ABBA_1
0.6752
p.P107S
DO8240
COAD
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.6752
p.D96H
DO229056
LICA
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.0833
p.D96E
SIDM00482
Chronic Myelogenous Leukemia
GDSC
LGPHLD
LIG_APCC_ABBA_1
0.0833
Drug responses associated with SPATA31A6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGPHLD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5TZJ5
Spermatogenesis-associated protein 31A1
LIG_APCC_ABBA_1
105:110
LGPHLD
APC,CDC20,FZR1
0.9874
More...
Q8IWB4
Spermatogenesis-associated protein 31A7
LIG_APCC_ABBA_1
105:110
LGPHLD
APC,CDC20,FZR1
0.8604
More...
Q5VU36
Spermatogenesis-associated protein 31A5
LIG_APCC_ABBA_1
105:110
LGPHLD
APC,CDC20,FZR1
0.8887
More...
Q5VVP1
Spermatogenesis-associated protein 31A6
LIG_APCC_ABBA_1
105:110
LGPHLD
APC,CDC20,FZR1
0.994
More...
Q5VYP0
Spermatogenesis-associated protein 31A3
LIG_APCC_ABBA_1
105:110
LGPHLD
APC,CDC20,FZR1
0.9544
More...