DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
LGPHLD
Uniprot ID:
Q8IWB4
Source protein:
Spermatogenesis-associated protein 31A7
Source gene:
SPATA31A7
Class:
LIG_APCC_ABBA_1
Location:
105:110
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8604
ASA_SCORE:
73.55
COIL:
0.8195
CONS_SCORE:
0.4115
DSS_SCORE:
0.5696
HELIX:
0.1025
FCONS_SCORE:
1.0152
RIG_SCORE:
0.6705
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S95L
TCGA-12-1597
GBM
TCGA
LGPHLD
LIG_APCC_ABBA_1
0.0556
p.S95L
TCGA-B5-A0JY
UCEC
TCGA
LGPHLD
LIG_APCC_ABBA_1
0.0556
p.S95L
DO12424
GBM
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.0556
p.S95L
DO43041
UCEC
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.0556
p.L98R
TCGA-AJ-A3EK
UCEC
TCGA
LGPHLD
LIG_APCC_ABBA_1
0.1389
p.L98R
DO41584
UCEC
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.1389
p.S95W
TCGA-DS-A1OA
CESC
TCGA
LGPHLD
LIG_APCC_ABBA_1
0.0556
p.S95W
DO6341
CESC
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.0556
p.S95W
DO229353
LAML
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.0556
p.L101P
DO1088
BRCA
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.2222
p.G119D
SIDM01191
Osteosarcoma
GDSC
LGPHLD
LIG_APCC_ABBA_1
0.0833
p.G115D
SIDM01752
Pancreatic Carcinoma
GDSC
LGPHLD
LIG_APCC_ABBA_1
0.1944
Drug responses associated with SPATA31A7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGPHLD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5TZJ5
Spermatogenesis-associated protein 31A1
LIG_APCC_ABBA_1
105:110
LGPHLD
APC,CDC20,FZR1
0.9874
More...
Q8IWB4
Spermatogenesis-associated protein 31A7
LIG_APCC_ABBA_1
105:110
LGPHLD
APC,CDC20,FZR1
0.8604
More...
Q5VU36
Spermatogenesis-associated protein 31A5
LIG_APCC_ABBA_1
105:110
LGPHLD
APC,CDC20,FZR1
0.8887
More...
Q5VVP1
Spermatogenesis-associated protein 31A6
LIG_APCC_ABBA_1
105:110
LGPHLD
APC,CDC20,FZR1
0.994
More...
Q5VYP0
Spermatogenesis-associated protein 31A3
LIG_APCC_ABBA_1
105:110
LGPHLD
APC,CDC20,FZR1
0.9544
More...