DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGPHLD
Uniprot ID:
Q5VYP0
Source protein:
Spermatogenesis-associated protein 31A3
Source gene:
SPATA31A3
Class:
LIG_APCC_ABBA_1
Location:
105:110
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9544
ASA_SCORE:
69.35
COIL:
0.8088
CONS_SCORE:
0.4114
DSS_SCORE:
0.5562
HELIX:
0.133
FCONS_SCORE:
1.0152
RIG_SCORE:
0.6709
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G106E
TCGA-2W-A8YY
CESC
TCGA
LGPHLD
LIG_APCC_ABBA_1
0.6087
p.G106E
DO223732
CESC
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.6087
p.Q116K
TCGA-AP-A1DP
UCEC
TCGA
LGPHLD
LIG_APCC_ABBA_1
0.1667
p.Q116K
DO42336
UCEC
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.1667
p.P120T
TCGA-CR-7398
HNSC
TCGA
LGPHLD
LIG_APCC_ABBA_1
0.0556
p.P120T
DO14782
HNSC
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.0556
p.G119S
TCGA-EE-A180
SKCM
TCGA
LGPHLD
LIG_APCC_ABBA_1
0.0833
p.G119S
DO47537
SKCM
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.0833
p.L105M
TCGA-EO-A3B0
UCEC
TCGA
LGPHLD
LIG_APCC_ABBA_1
0.5999
p.L105M
DO219773
UCEC
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.5999
p.L109P
DO229232
THCA
ICGC
LGPHLD
LIG_APCC_ABBA_1
0.6471
Drug responses associated with SPATA31A3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGPHLD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5TZJ5
Spermatogenesis-associated protein 31A1
LIG_APCC_ABBA_1
105:110
LGPHLD
APC,CDC20,FZR1
0.9874
More...
Q8IWB4
Spermatogenesis-associated protein 31A7
LIG_APCC_ABBA_1
105:110
LGPHLD
APC,CDC20,FZR1
0.8604
More...
Q5VU36
Spermatogenesis-associated protein 31A5
LIG_APCC_ABBA_1
105:110
LGPHLD
APC,CDC20,FZR1
0.8887
More...
Q5VVP1
Spermatogenesis-associated protein 31A6
LIG_APCC_ABBA_1
105:110
LGPHLD
APC,CDC20,FZR1
0.994
More...
Q5VYP0
Spermatogenesis-associated protein 31A3
LIG_APCC_ABBA_1
105:110
LGPHLD
APC,CDC20,FZR1
0.9544
More...