DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LKENN
Uniprot ID:
P30622
Source protein:
CAP-Gly domain-containing linker protein 1
Source gene:
CLIP1
Class:
DEG_APCC_KENBOX_2
Location:
1126:1130
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7892
ASA_SCORE:
104.46
COIL:
0.1098
CONS_SCORE:
0.4448
DSS_SCORE:
0.4445
HELIX:
0.8894
FCONS_SCORE:
1.1914
RIG_SCORE:
0.7658
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L1123W
TCGA-HU-A4GF
STAD
TCGA
LKENN
DEG_APCC_KENBOX_2
0.25
p.T1116N
DO229041
LICA
ICGC
LKENN
DEG_APCC_KENBOX_2
0.0556
p.A1125T
KMH-2
thyroid
COSMIC
LKENN
DEG_APCC_KENBOX_2
0.3056
p.A1128V
TOV-21G
ovary
COSMIC
LKENN
DEG_APCC_KENBOX_2
0.6936
Drug responses associated with CLIP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P30622
CAP-Gly domain-containing linker protein 1
DEG_APCC_KENBOX_2
1126:1130
LKENN
APC,CDC20,FZR1
0.7892
More...
Q9H4Z3
mRNA
DEG_APCC_KENBOX_2
383:387
LKENN
APC,CDC20,FZR1
0.7225
More...
Q03828
Homeobox even-skipped homolog protein 2
DEG_APCC_KENBOX_2
136:140
LKENN
APC,CDC20,FZR1
0.9747
More...
Q8N4H0
Spermatogenesis associated 6-like protein
DEG_APCC_KENBOX_2
170:174
LKENN
APC,CDC20,FZR1
0.9657
More...