DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LKENN
Uniprot ID:
Q8N4H0
Source protein:
Spermatogenesis associated 6-like protein
Source gene:
SPATA6L
Class:
DEG_APCC_KENBOX_2
Location:
170:174
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9657
ASA_SCORE:
106.42
COIL:
0.5434
CONS_SCORE:
0.4013
DSS_SCORE:
0.5019
HELIX:
0.4516
FCONS_SCORE:
1.0683
RIG_SCORE:
0.7648
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R183M
TCGA-AP-A1DK
UCEC
TCGA
LKENN
DEG_APCC_KENBOX_2
0.0833
p.P171L
TCGA-EE-A20C
SKCM
TCGA
LKENN
DEG_APCC_KENBOX_2
0.7582
p.P171L
DO222775
MELA
ICGC
LKENN
DEG_APCC_KENBOX_2
0.7582
p.V166M
TCGA-F7-A61V
HNSC
TCGA
LKENN
DEG_APCC_KENBOX_2
0.2222
p.L181F
TCGA-JW-A5VL
CESC
TCGA
LKENN
DEG_APCC_KENBOX_2
0.1389
p.T165S
DO233724
GACA
ICGC
LKENN
DEG_APCC_KENBOX_2
0.1944
p.T165N
DO229018
LICA
ICGC
LKENN
DEG_APCC_KENBOX_2
0.1944
p.A169E
DO229026
LICA
ICGC
LKENN
DEG_APCC_KENBOX_2
0.3056
p.P162S
DO229459
SKCA
ICGC
LKENN
DEG_APCC_KENBOX_2
0.1111
p.G181C
DO223282
UCEC
ICGC
LKENN
DEG_APCC_KENBOX_2
0.1389
p.R182W
SIDM00364
B-Lymphoblastic Leukemia
GDSC
LKENN
DEG_APCC_KENBOX_2
0.1111
p.R182W
ACH-002059
Leukemia
CCLE
LKENN
DEG_APCC_KENBOX_2
0.1111
p.R182W
P30-OHK
haematopoietic_and_lymphoid_tissue
COSMIC
LKENN
DEG_APCC_KENBOX_2
0.1111
p.S163T
NCI-H345
lung
COSMIC
LKENN
DEG_APCC_KENBOX_2
0.1389
Drug responses associated with SPATA6L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P30622
CAP-Gly domain-containing linker protein 1
DEG_APCC_KENBOX_2
1126:1130
LKENN
APC,CDC20,FZR1
0.7892
More...
Q9H4Z3
mRNA
DEG_APCC_KENBOX_2
383:387
LKENN
APC,CDC20,FZR1
0.7225
More...
Q03828
Homeobox even-skipped homolog protein 2
DEG_APCC_KENBOX_2
136:140
LKENN
APC,CDC20,FZR1
0.9747
More...
Q8N4H0
Spermatogenesis associated 6-like protein
DEG_APCC_KENBOX_2
170:174
LKENN
APC,CDC20,FZR1
0.9657
More...