DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKENN
Uniprot ID:
Q9H4Z3
Source protein:
mRNA
Source gene:
PCIF1
Class:
DEG_APCC_KENBOX_2
Location:
383:387
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7225
ASA_SCORE:
96.84
COIL:
0.4602
CONS_SCORE:
0.6202
DSS_SCORE:
0.1843
HELIX:
0.5378
FCONS_SCORE:
1.4589
RIG_SCORE:
0.8004
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H379Q
TCGA-23-2084
OV
TCGA
LKENN
DEG_APCC_KENBOX_2
0.2222
p.H379Q
DO30310
OV
ICGC
LKENN
DEG_APCC_KENBOX_2
0.2222
p.R376Q
TCGA-FD-A3SN
BLCA
TCGA
LKENN
DEG_APCC_KENBOX_2
0.1389
p.R376Q
DO490
BLCA
ICGC
LKENN
DEG_APCC_KENBOX_2
0.1389
p.R376Q
DO222846
COCA
ICGC
LKENN
DEG_APCC_KENBOX_2
0.1389
p.A394V
TCGA-IB-7651
PAAD
TCGA
LKENN
DEG_APCC_KENBOX_2
0.1389
p.A394V
DO46657
PAAD
ICGC
LKENN
DEG_APCC_KENBOX_2
0.1389
p.K373R
DO229013
COCA
ICGC
LKENN
DEG_APCC_KENBOX_2
0.1667
p.R374W
DO233941
GACA
ICGC
LKENN
DEG_APCC_KENBOX_2
0.0833
p.V392G
DO52352
LUSC
ICGC
LKENN
DEG_APCC_KENBOX_2
0.1944
Drug responses associated with PCIF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKENN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P30622
CAP-Gly domain-containing linker protein 1
DEG_APCC_KENBOX_2
1126:1130
LKENN
APC,CDC20,FZR1
0.7892
More...
Q9H4Z3
mRNA
DEG_APCC_KENBOX_2
383:387
LKENN
APC,CDC20,FZR1
0.7225
More...
Q03828
Homeobox even-skipped homolog protein 2
DEG_APCC_KENBOX_2
136:140
LKENN
APC,CDC20,FZR1
0.9747
More...
Q8N4H0
Spermatogenesis associated 6-like protein
DEG_APCC_KENBOX_2
170:174
LKENN
APC,CDC20,FZR1
0.9657
More...