DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPPPS
Uniprot ID:
P36956
Source protein:
Sterol regulatory element-binding protein 1
Source gene:
SREBF1
Class:
DEG_SCF_FBW7_1
Location:
425:430
E3 ligase:
FBXW7
DEGRON score:
0.999
ASA_SCORE:
82.4833
COIL:
0.963
CONS_SCORE:
0.4553
DSS_SCORE:
0.732
HELIX:
0.0192
FCONS_SCORE:
1.4067
RIG_SCORE:
0.6681
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L417M
TCGA-D3-A3C8
SKCM
TCGA
LTPPPS
DEG_SCF_FBW7_1
0.1111
p.R418C
TCGA-D5-6928
COAD
TCGA
LTPPPS
DEG_SCF_FBW7_1
0.25
p.S416T
TCGA-D8-A1JD
BRCA
TCGA
LTPPPS
DEG_SCF_FBW7_1
0.0833
p.T419I
TCGA-DU-5852
LGG
TCGA
LTPPPS
DEG_SCF_FBW7_1
0.1667
p.K423R
TCGA-DW-7839
KIRP
TCGA
LTPPPS
DEG_SCF_FBW7_1
0.2778
p.S426F
TCGA-E5-A4U1
BLCA
TCGA
LTPPPS
DEG_SCF_FBW7_1
0.7982
p.V421A
TCGA-FI-A2D5
UCEC
TCGA
LTPPPS
DEG_SCF_FBW7_1
0.2222
p.L417V
TCGA-KP-A3W1
UCEC
TCGA
LTPPPS
DEG_SCF_FBW7_1
0.1111
p.H420Q
DO224965
BRCA
ICGC
LTPPPS
DEG_SCF_FBW7_1
0.1944
p.H420Q
DO227820
BRCA
ICGC
LTPPPS
DEG_SCF_FBW7_1
0.1944
p.M428V
DO219629
BRCA
ICGC
LTPPPS
DEG_SCF_FBW7_1
0.7208
p.G434R
DO234183
ESAD
ICGC
LTPPPS
DEG_SCF_FBW7_1
0.6667
p.G434R
DO52409
UCEC
ICGC
LTPPPS
DEG_SCF_FBW7_1
0.6667
p.A415T
DO52268
LIHC
ICGC
LTPPPS
DEG_SCF_FBW7_1
0.0556
p.C434R
SIDM01090
Colorectal Carcinoma
GDSC
LTPPPS
DEG_SCF_FBW7_1
0.6667
p.C434R
RKO
large_intestine
COSMIC
LTPPPS
DEG_SCF_FBW7_1
0.6667
p.S432L
SIDM00145
T-Lymphoblastic Leukemia
GDSC
LTPPPS
DEG_SCF_FBW7_1
0.2778
p.S432L
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
LTPPPS
DEG_SCF_FBW7_1
0.2778
p.E422D
ACH-000984
Endometrial/Uterine Cancer
CCLE
LTPPPS
DEG_SCF_FBW7_1
0.25
Drug responses associated with SREBF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPPPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A7MD48
Serine/arginine repetitive matrix protein 4
DEG_SCF_FBW7_1
100:105
LTPPPS
FBXW7
0.8885
More...
P36956
Sterol regulatory element-binding protein 1
DEG_SCF_FBW7_1
425:430
LTPPPS
FBXW7
0.999
More...
Q13887
Krueppel-like factor 5
DEG_SCF_FBW7_1
322:327
LTPPPS
FBXW7
0.9988
More...
Q8TB72
Pumilio homolog 2
DEG_SCF_FBW7_1
635:640
LTPPPS
FBXW7
0.9898
More...