DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPPPS
Uniprot ID:
Q8TB72
Source protein:
Pumilio homolog 2
Source gene:
PUM2
Class:
DEG_SCF_FBW7_1
Location:
635:640
E3 ligase:
FBXW7
DEGRON score:
0.9898
ASA_SCORE:
60.5167
COIL:
0.9373
CONS_SCORE:
0.4245
DSS_SCORE:
0.7355
HELIX:
0.0323
FCONS_SCORE:
1.5994
RIG_SCORE:
0.5506
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T636K
TCGA-14-1396
GBM
TCGA
LTPPPS
DEG_SCF_FBW7_1
0.7306
p.T636K
DO11429
GBM
ICGC
LTPPPS
DEG_SCF_FBW7_1
0.7306
p.P638L
TCGA-A5-A0G2
UCEC
TCGA
LTPPPS
DEG_SCF_FBW7_1
0.6471
p.P638L
DO41235
UCEC
ICGC
LTPPPS
DEG_SCF_FBW7_1
0.6471
p.S647L
TCGA-C5-A1BI
CESC
TCGA
LTPPPS
DEG_SCF_FBW7_1
0.1389
p.S647L
DO48372
BLCA
ICGC
LTPPPS
DEG_SCF_FBW7_1
0.1389
p.S647L
DO44305
CESC
ICGC
LTPPPS
DEG_SCF_FBW7_1
0.1389
p.F635L
DO1132
BRCA
ICGC
LTPPPS
DEG_SCF_FBW7_1
0.6981
p.N637S
DO3686
BRCA
ICGC
LTPPPS
DEG_SCF_FBW7_1
0.7069
p.T636M
DO48296
ESCA
ICGC
LTPPPS
DEG_SCF_FBW7_1
0.7423
p.T636M
SIDM00999
Bladder Carcinoma
GDSC
LTPPPS
DEG_SCF_FBW7_1
0.7423
p.T636M
ACH-000973
Bladder Cancer
CCLE
LTPPPS
DEG_SCF_FBW7_1
0.7423
p.T636M
639-V
urinary_tract
COSMIC
LTPPPS
DEG_SCF_FBW7_1
0.7423
p.P637T
DO228948
LICA
ICGC
LTPPPS
DEG_SCF_FBW7_1
0.7031
p.P637Q
DO229038
LICA
ICGC
LTPPPS
DEG_SCF_FBW7_1
0.7035
p.P636L
DO222423
MELA
ICGC
LTPPPS
DEG_SCF_FBW7_1
0.7582
p.P636L
DO37425
SKCM
ICGC
LTPPPS
DEG_SCF_FBW7_1
0.7582
p.S648F
DO229240
THCA
ICGC
LTPPPS
DEG_SCF_FBW7_1
0.1111
Drug responses associated with PUM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPPPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A7MD48
Serine/arginine repetitive matrix protein 4
DEG_SCF_FBW7_1
100:105
LTPPPS
FBXW7
0.8885
More...
P36956
Sterol regulatory element-binding protein 1
DEG_SCF_FBW7_1
425:430
LTPPPS
FBXW7
0.999
More...
Q13887
Krueppel-like factor 5
DEG_SCF_FBW7_1
322:327
LTPPPS
FBXW7
0.9988
More...
Q8TB72
Pumilio homolog 2
DEG_SCF_FBW7_1
635:640
LTPPPS
FBXW7
0.9898
More...