DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NKENR
Uniprot ID:
P16949
Source protein:
Stathmin
Source gene:
STMN1
Class:
DEG_APCC_KENBOX_2
Location:
108:112
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7627
ASA_SCORE:
111.7
COIL:
0.0688
CONS_SCORE:
0.6504
DSS_SCORE:
0.627
HELIX:
0.9362
FCONS_SCORE:
1.0589
RIG_SCORE:
0.6839
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R122P
TCGA-17-Z000
LUAD
TCGA
NKENR
DEG_APCC_KENBOX_2
0.0556
p.R112Q
TCGA-A5-A0G2
UCEC
TCGA
NKENR
DEG_APCC_KENBOX_2
0.6218
p.R112Q
DO41235
UCEC
ICGC
NKENR
DEG_APCC_KENBOX_2
0.6218
p.E110K
TCGA-LN-A4A9
ESCA
TCGA
NKENR
DEG_APCC_KENBOX_2
0.7022
p.H103N
DO229035
LICA
ICGC
NKENR
DEG_APCC_KENBOX_2
0.1944
Drug responses associated with STMN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NKENR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P16949
Stathmin
DEG_APCC_KENBOX_2
108:112
NKENR
APC,CDC20,FZR1
0.7627
More...
P20930
Filaggrin
DEG_APCC_KENBOX_2
118:122
NKENR
APC,CDC20,FZR1
0.7527
More...
Q5T6F2
Ubiquitin-associated protein 2
DEG_APCC_KENBOX_2
116:120
NKENR
APC,CDC20,FZR1
0.9218
More...
Q6PKC3
Thioredoxin domain-containing protein 11
DEG_APCC_KENBOX_2
979:983
NKENR
APC,CDC20,FZR1
0.9541
More...
Q9H169
Stathmin-4
DEG_APCC_KENBOX_2
152:156
NKENR
APC,CDC20,FZR1
0.9251
More...