DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NKENR
Uniprot ID:
Q5T6F2
Source protein:
Ubiquitin-associated protein 2
Source gene:
UBAP2
Class:
DEG_APCC_KENBOX_2
Location:
116:120
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9218
ASA_SCORE:
119.12
COIL:
0.428
CONS_SCORE:
0.6618
DSS_SCORE:
0.613
HELIX:
0.5612
FCONS_SCORE:
1.2627
RIG_SCORE:
0.6531
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K107N
TCGA-EO-A3B0
UCEC
TCGA
NKENR
DEG_APCC_KENBOX_2
0.1944
p.K107N
DO219773
UCEC
ICGC
NKENR
DEG_APCC_KENBOX_2
0.1944
p.K107N
SIDM00118
Colorectal Carcinoma
GDSC
NKENR
DEG_APCC_KENBOX_2
0.1944
p.K107N
ACH-001081
Colon/Colorectal Cancer
CCLE
NKENR
DEG_APCC_KENBOX_2
0.1944
p.K107N
HCC2998
large_intestine
COSMIC
NKENR
DEG_APCC_KENBOX_2
0.1944
p.N108I
TCGA-ER-A194
SKCM
TCGA
NKENR
DEG_APCC_KENBOX_2
0.1111
p.N108I
DO47646
SKCM
ICGC
NKENR
DEG_APCC_KENBOX_2
0.1111
p.E121K
DO229364
BTCA
ICGC
NKENR
DEG_APCC_KENBOX_2
0.3056
p.N119S
DO227987
COCA
ICGC
NKENR
DEG_APCC_KENBOX_2
0.7069
p.Q127K
DO228978
LICA
ICGC
NKENR
DEG_APCC_KENBOX_2
0.1389
p.F108V
DO24441
LUAD
ICGC
NKENR
DEG_APCC_KENBOX_2
0.1111
p.A123T
DO229257
THCA
ICGC
NKENR
DEG_APCC_KENBOX_2
0.3611
p.S129C
SIDM00216
Colorectal Carcinoma
GDSC
NKENR
DEG_APCC_KENBOX_2
0.0833
p.S129C
SIDM01032
Esophageal Squamous Cell Carcinoma
GDSC
NKENR
DEG_APCC_KENBOX_2
0.0833
p.S129C
SIDM01446
Glioblastoma
GDSC
NKENR
DEG_APCC_KENBOX_2
0.0833
p.S129C
SNU-175
large_intestine
COSMIC
NKENR
DEG_APCC_KENBOX_2
0.0833
p.R130H
SIDM00433
T-Lymphoblastic Leukemia
GDSC
NKENR
DEG_APCC_KENBOX_2
0.0556
p.R130H
ACH-000795
Leukemia
CCLE
NKENR
DEG_APCC_KENBOX_2
0.0556
p.R130H
MOLT-13
haematopoietic_and_lymphoid_tissue
COSMIC
NKENR
DEG_APCC_KENBOX_2
0.0556
p.S129R
ACH-001796
Liposarcoma
CCLE
NKENR
DEG_APCC_KENBOX_2
0.0833
p.F108C
ES-2
ovary
COSMIC
NKENR
DEG_APCC_KENBOX_2
0.1111
Drug responses associated with UBAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NKENR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P16949
Stathmin
DEG_APCC_KENBOX_2
108:112
NKENR
APC,CDC20,FZR1
0.7627
More...
P20930
Filaggrin
DEG_APCC_KENBOX_2
118:122
NKENR
APC,CDC20,FZR1
0.7527
More...
Q5T6F2
Ubiquitin-associated protein 2
DEG_APCC_KENBOX_2
116:120
NKENR
APC,CDC20,FZR1
0.9218
More...
Q6PKC3
Thioredoxin domain-containing protein 11
DEG_APCC_KENBOX_2
979:983
NKENR
APC,CDC20,FZR1
0.9541
More...
Q9H169
Stathmin-4
DEG_APCC_KENBOX_2
152:156
NKENR
APC,CDC20,FZR1
0.9251
More...