DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NKENV
Uniprot ID:
Q96EP1
Source protein:
E3 ubiquitin-protein ligase CHFR
Source gene:
CHFR
Class:
DEG_APCC_KENBOX_2
Location:
137:141
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7459
ASA_SCORE:
83.24
COIL:
0.5006
CONS_SCORE:
0.3821
DSS_SCORE:
0.6077
HELIX:
0.2794
FCONS_SCORE:
1.0703
RIG_SCORE:
0.7056
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G144E
TCGA-DX-A8BP
SARC
TCGA
NKENV
DEG_APCC_KENBOX_2
0.25
p.G144E
DO220056
SARC
ICGC
NKENV
DEG_APCC_KENBOX_2
0.25
p.M129I
TCGA-UY-A9PA
BLCA
TCGA
NKENV
DEG_APCC_KENBOX_2
0.1111
p.M129I
DO219040
BLCA
ICGC
NKENV
DEG_APCC_KENBOX_2
0.1111
p.A144S
DO234285
ESAD
ICGC
NKENV
DEG_APCC_KENBOX_2
0.25
p.C139S
DO14236
HNSC
ICGC
NKENV
DEG_APCC_KENBOX_2
0.7541
p.N137K
SIDM00072
Non-Cancerous
GDSC
NKENV
DEG_APCC_KENBOX_2
0.5806
p.N137K
SIDM00114
Non-Small Cell Lung Carcinoma
GDSC
NKENV
DEG_APCC_KENBOX_2
0.5806
p.N137K
SIDM00493
Other Solid Cancers
GDSC
NKENV
DEG_APCC_KENBOX_2
0.5806
p.N137K
SIDM00672
Hepatocellular Carcinoma
GDSC
NKENV
DEG_APCC_KENBOX_2
0.5806
p.A136S
SIDM00817
Kidney Carcinoma
GDSC
NKENV
DEG_APCC_KENBOX_2
0.3056
p.A136S
ACH-002191
Kidney Cancer
CCLE
NKENV
DEG_APCC_KENBOX_2
0.3056
p.A136S
RCC-JW
kidney
COSMIC
NKENV
DEG_APCC_KENBOX_2
0.3056
p.A148S
ACH-000990
Endometrial/Uterine Cancer
CCLE
NKENV
DEG_APCC_KENBOX_2
0.1389
p.P128L
ACH-001550
Skin Cancer
CCLE
NKENV
DEG_APCC_KENBOX_2
0.0833
p.P128L
MCC13
skin
COSMIC
NKENV
DEG_APCC_KENBOX_2
0.0833
p.P151Q
ATN-1
haematopoietic_and_lymphoid_tissue
COSMIC
NKENV
DEG_APCC_KENBOX_2
0.0556
Drug responses associated with CHFR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NKENV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14680
Maternal embryonic leucine zipper kinase
DEG_APCC_KENBOX_2
422:426
NKENV
APC,CDC20,FZR1
0.9994
More...
Q96EP1
E3 ubiquitin-protein ligase CHFR
DEG_APCC_KENBOX_2
137:141
NKENV
APC,CDC20,FZR1
0.7459
More...
Q9C0D0
Phosphatase and actin regulator 1
DEG_APCC_KENBOX_2
375:379
NKENV
APC,CDC20,FZR1
0.7863
More...
Q9HC77
Centromere protein J
DEG_APCC_KENBOX_2
499:503
NKENV
APC,CDC20,FZR1
0.8995
More...