DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PCSTT
Uniprot ID:
Q13639
Source protein:
5-hydroxytryptamine receptor 4
Source gene:
HTR4
Class:
DEG_SPOP_SBC_1
Location:
345:349
E3 ligase:
SPOP
DEGRON score:
0.8001
ASA_SCORE:
81.34
COIL:
0.8006
CONS_SCORE:
0.4312
DSS_SCORE:
0.2774
HELIX:
0.021
FCONS_SCORE:
1.0689
RIG_SCORE:
0.7758
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G353E
TCGA-DX-AB2E
SARC
TCGA
PCSTT
DEG_SPOP_SBC_1
0.2222
p.G353E
DO220073
SARC
ICGC
PCSTT
DEG_SPOP_SBC_1
0.2222
p.T348P
TCGA-F5-6814
READ
TCGA
PCSTT
DEG_SPOP_SBC_1
0.7031
p.T348P
DO36556
READ
ICGC
PCSTT
DEG_SPOP_SBC_1
0.7031
p.T348P
SIDM00630
Breast Carcinoma
GDSC
PCSTT
DEG_SPOP_SBC_1
0.7031
p.T348P
ACH-000876
Breast Cancer
CCLE
PCSTT
DEG_SPOP_SBC_1
0.7031
p.T348P
MDA-MB-415
breast
COSMIC
PCSTT
DEG_SPOP_SBC_1
0.7031
p.L340V
TCGA-LP-A4AX
CESC
TCGA
PCSTT
DEG_SPOP_SBC_1
0.1944
p.L340V
DO44358
CESC
ICGC
PCSTT
DEG_SPOP_SBC_1
0.1944
p.S354F
DO220906
MELA
ICGC
PCSTT
DEG_SPOP_SBC_1
0.6389
p.P345S
DO222409
MELA
ICGC
PCSTT
DEG_SPOP_SBC_1
0.6752
p.G353R
DO229502
SKCA
ICGC
PCSTT
DEG_SPOP_SBC_1
0.2222
p.L340Q
SIDM00545
Melanoma
GDSC
PCSTT
DEG_SPOP_SBC_1
0.1944
p.L340Q
ACH-000987
Skin Cancer
CCLE
PCSTT
DEG_SPOP_SBC_1
0.1944
p.L340Q
Mewo
skin
COSMIC
PCSTT
DEG_SPOP_SBC_1
0.1944
Drug responses associated with HTR4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PCSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12824
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
DEG_SPOP_SBC_1
146:150
PCSTT
SPOP
0.9952
More...
Q13639
5-hydroxytryptamine receptor 4
DEG_SPOP_SBC_1
345:349
PCSTT
SPOP
0.8001
More...
Q8NAT2
Tudor domain-containing protein 5
DEG_SPOP_SBC_1
883:887
PCSTT
SPOP
0.9327
More...
Q4G112
Heat shock factor protein 5
DEG_SPOP_SBC_1
358:362
PCSTT
SPOP
0.8576
More...