DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PCSTT
Uniprot ID:
Q8NAT2
Source protein:
Tudor domain-containing protein 5
Source gene:
TDRD5
Class:
DEG_SPOP_SBC_1
Location:
883:887
E3 ligase:
SPOP
DEGRON score:
0.9327
ASA_SCORE:
88.44
COIL:
0.9316
CONS_SCORE:
0.2072
DSS_SCORE:
0.6075
HELIX:
0.034
FCONS_SCORE:
0.716
RIG_SCORE:
0.6646
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S893Y
TCGA-06-5416
GBM
TCGA
PCSTT
DEG_SPOP_SBC_1
0.1667
p.S893Y
DO10880
GBM
ICGC
PCSTT
DEG_SPOP_SBC_1
0.1667
p.N879K
TCGA-77-7463
LUSC
TCGA
PCSTT
DEG_SPOP_SBC_1
0.2222
p.R880G
TCGA-86-8358
LUAD
TCGA
PCSTT
DEG_SPOP_SBC_1
0.25
p.R880G
DO25471
LUAD
ICGC
PCSTT
DEG_SPOP_SBC_1
0.25
p.D886N
TCGA-AG-A00Y
READ
TCGA
PCSTT
DEG_SPOP_SBC_1
0.6932
p.D892N
TCGA-AG-A00Y
READ
TCGA
PCSTT
DEG_SPOP_SBC_1
0.1944
p.R880M
TCGA-AP-A059
UCEC
TCGA
PCSTT
DEG_SPOP_SBC_1
0.25
p.R880M
DO41361
UCEC
ICGC
PCSTT
DEG_SPOP_SBC_1
0.25
p.T881I
TCGA-AX-A05Z
UCEC
TCGA
PCSTT
DEG_SPOP_SBC_1
0.2778
p.T881I
DO40884
UCEC
ICGC
PCSTT
DEG_SPOP_SBC_1
0.2778
p.K883N
TCGA-EO-A22R
UCEC
TCGA
PCSTT
DEG_SPOP_SBC_1
0.6918
p.S891T
DO228194
LICA
ICGC
PCSTT
DEG_SPOP_SBC_1
0.2222
p.S897F
DO24140
LUAD
ICGC
PCSTT
DEG_SPOP_SBC_1
0.0556
p.A893T
DO41752
UCEC
ICGC
PCSTT
DEG_SPOP_SBC_1
0.1667
p.G889D
SIDM01689
B-Lymphoblastic Leukemia
GDSC
PCSTT
DEG_SPOP_SBC_1
0.2778
p.D886Y
SIDM01611
Endometrial Carcinoma
GDSC
PCSTT
DEG_SPOP_SBC_1
0.7325
p.K895R
ACH-000995
Leukemia
CCLE
PCSTT
DEG_SPOP_SBC_1
0.2222
p.K895R
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
PCSTT
DEG_SPOP_SBC_1
0.2222
p.D890Y
ACH-001061
Colon/Colorectal Cancer
CCLE
PCSTT
DEG_SPOP_SBC_1
0.25
p.S892C
ACH-001459
Colon/Colorectal Cancer
CCLE
PCSTT
DEG_SPOP_SBC_1
0.1944
Drug responses associated with TDRD5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PCSTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12824
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
DEG_SPOP_SBC_1
146:150
PCSTT
SPOP
0.9952
More...
Q13639
5-hydroxytryptamine receptor 4
DEG_SPOP_SBC_1
345:349
PCSTT
SPOP
0.8001
More...
Q8NAT2
Tudor domain-containing protein 5
DEG_SPOP_SBC_1
883:887
PCSTT
SPOP
0.9327
More...
Q4G112
Heat shock factor protein 5
DEG_SPOP_SBC_1
358:362
PCSTT
SPOP
0.8576
More...