DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PHTSS
Uniprot ID:
P56645
Source protein:
Period circadian protein homolog 3
Source gene:
PER3
Class:
DEG_SPOP_SBC_1
Location:
778:782
E3 ligase:
SPOP
DEGRON score:
0.9879
ASA_SCORE:
80.3
COIL:
0.953
CONS_SCORE:
0.3555
DSS_SCORE:
0.5373
HELIX:
0.0188
FCONS_SCORE:
1.0256
RIG_SCORE:
0.5407
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P769S
TCGA-4R-AA8I
LIHC
TCGA
PHTSS
DEG_SPOP_SBC_1
0.0833
p.A788V
TCGA-BT-A3PJ
BLCA
TCGA
PHTSS
DEG_SPOP_SBC_1
0.1667
p.P772L
TCGA-HG-A9SC
CESC
TCGA
PHTSS
DEG_SPOP_SBC_1
0.1667
p.A771V
DO222955
BTCA
ICGC
PHTSS
DEG_SPOP_SBC_1
0.1389
p.P780L
DO51603
CESC
ICGC
PHTSS
DEG_SPOP_SBC_1
0.7582
p.P780S
DO222755
COCA
ICGC
PHTSS
DEG_SPOP_SBC_1
0.6752
p.Q776H
DO228974
LICA
ICGC
PHTSS
DEG_SPOP_SBC_1
0.2778
p.R768L
DO229015
LICA
ICGC
PHTSS
DEG_SPOP_SBC_1
0.0556
p.P777S
DO49657
LIHC
ICGC
PHTSS
DEG_SPOP_SBC_1
0.3056
p.Q773K
SIDM01690
Plasma Cell Myeloma
GDSC
PHTSS
DEG_SPOP_SBC_1
0.1944
p.Q773K
ACH-000453
Myeloma
CCLE
PHTSS
DEG_SPOP_SBC_1
0.1944
p.S781F
SIDM00217
Colorectal Carcinoma
GDSC
PHTSS
DEG_SPOP_SBC_1
0.7982
p.S781F
ACH-000999
Colon/Colorectal Cancer
CCLE
PHTSS
DEG_SPOP_SBC_1
0.7982
p.S781F
SNU-1040
large_intestine
COSMIC
PHTSS
DEG_SPOP_SBC_1
0.7982
p.A782P
SIDM00363
Acute Myeloid Leukemia
GDSC
PHTSS
DEG_SPOP_SBC_1
0.7503
p.A782P
ACH-000770
Leukemia
CCLE
PHTSS
DEG_SPOP_SBC_1
0.7503
p.A782P
P31-FUJ
haematopoietic_and_lymphoid_tissue
COSMIC
PHTSS
DEG_SPOP_SBC_1
0.7503
p.H772R
ACH-002149
Ovarian Cancer
CCLE
PHTSS
DEG_SPOP_SBC_1
0.1667
p.A774P
P31-FUJ
haematopoietic_and_lymphoid_tissue
COSMIC
PHTSS
DEG_SPOP_SBC_1
0.2222
p.S773F
SNU-1040
large_intestine
COSMIC
PHTSS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with PER3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PHTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95402
Mediator of RNA polymerase II transcription subunit 26
DEG_SPOP_SBC_1
228:232
PHTSS
SPOP
0.9917
More...
P56645
Period circadian protein homolog 3
DEG_SPOP_SBC_1
778:782
PHTSS
SPOP
0.9879
More...
Q8IXK0
Polyhomeotic-like protein 2
DEG_SPOP_SBC_1
8:12
PHTSS
SPOP
0.9118
More...
Q9BQS2
Synaptotagmin-15
DEG_SPOP_SBC_1
111:115
PHTSS
SPOP
0.9607
More...
Q9BWK5
Cell cycle regulator of non-homologous end joining
DEG_SPOP_SBC_1
100:104
PHTSS
SPOP
0.9513
More...