DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PISTT
Uniprot ID:
O75112
Source protein:
LIM domain-binding protein 3
Source gene:
LDB3
Class:
DEG_SPOP_SBC_1
Location:
88:92
E3 ligase:
SPOP
DEGRON score:
0.9903
ASA_SCORE:
97.66
COIL:
0.9442
CONS_SCORE:
0.518
DSS_SCORE:
0.5936
HELIX:
0.02
FCONS_SCORE:
1.0587
RIG_SCORE:
0.6563
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L78H
TCGA-95-7567
LUAD
TCGA
PISTT
DEG_SPOP_SBC_1
0.0556
p.L78H
DO25564
LUAD
ICGC
PISTT
DEG_SPOP_SBC_1
0.0556
p.R85C
TCGA-BR-4370
STAD
TCGA
PISTT
DEG_SPOP_SBC_1
0.25
p.R85C
DO222798
COCA
ICGC
PISTT
DEG_SPOP_SBC_1
0.25
p.R85C
DO38499
STAD
ICGC
PISTT
DEG_SPOP_SBC_1
0.25
p.P99L
TCGA-EE-A29E
SKCM
TCGA
PISTT
DEG_SPOP_SBC_1
0.1389
p.P99L
DO37831
SKCM
ICGC
PISTT
DEG_SPOP_SBC_1
0.1389
p.P86S
DO227802
COCA
ICGC
PISTT
DEG_SPOP_SBC_1
0.2778
p.P95A
DO222705
ESCA
ICGC
PISTT
DEG_SPOP_SBC_1
0.25
p.A93T
DO50970
LICA
ICGC
PISTT
DEG_SPOP_SBC_1
0.3056
p.P101L
SIDM01265
Plasma Cell Myeloma
GDSC
PISTT
DEG_SPOP_SBC_1
0.0833
p.P101L
SIDM00656
Burkitt's Lymphoma
GDSC
PISTT
DEG_SPOP_SBC_1
0.0833
p.P101L
SIDM00633
Breast Carcinoma
GDSC
PISTT
DEG_SPOP_SBC_1
0.0833
p.P101L
SIDM00930
Osteosarcoma
GDSC
PISTT
DEG_SPOP_SBC_1
0.0833
p.P101L
SIDM00721
Small Cell Lung Carcinoma
GDSC
PISTT
DEG_SPOP_SBC_1
0.0833
p.P101L
SIDM00257
Neuroblastoma
GDSC
PISTT
DEG_SPOP_SBC_1
0.0833
p.P101L
SIDM00641
Burkitt's Lymphoma
GDSC
PISTT
DEG_SPOP_SBC_1
0.0833
p.T91M
SIDM00905
Cervical Carcinoma
GDSC
PISTT
DEG_SPOP_SBC_1
0.7423
p.T91M
ACH-001334
Cervical Cancer
CCLE
PISTT
DEG_SPOP_SBC_1
0.7423
p.T91M
C-4-I
cervix
COSMIC
PISTT
DEG_SPOP_SBC_1
0.7423
Drug responses associated with LDB3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PISTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60583
Cyclin-T2
DEG_SPOP_SBC_1
422:426
PISTT
SPOP
0.9748
More...
O75112
LIM domain-binding protein 3
DEG_SPOP_SBC_1
88:92
PISTT
SPOP
0.9903
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1457:1461
PISTT
SPOP
0.5827
More...
Q8IZF6
Adhesion G-protein coupled receptor G4
DEG_SPOP_SBC_1
1894:1898
PISTT
SPOP
0.979
More...