DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PITST
Uniprot ID:
P13611
Source protein:
Versican core protein
Source gene:
VCAN
Class:
DEG_SPOP_SBC_1
Location:
908:912
E3 ligase:
SPOP
DEGRON score:
0.9967
ASA_SCORE:
82.34
COIL:
0.7952
CONS_SCORE:
0.4301
DSS_SCORE:
0.5979
HELIX:
0.0162
FCONS_SCORE:
1.1319
RIG_SCORE:
0.7257
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R898G
TCGA-B5-A3FC
UCEC
TCGA
PITST
DEG_SPOP_SBC_1
0.0556
p.R898G
DO41871
UCEC
ICGC
PITST
DEG_SPOP_SBC_1
0.0556
p.D899Y
TCGA-EO-A22R
UCEC
TCGA
PITST
DEG_SPOP_SBC_1
0.0833
p.D899Y
DO42713
UCEC
ICGC
PITST
DEG_SPOP_SBC_1
0.0833
p.G922R
TCGA-ER-A198
SKCM
TCGA
PITST
DEG_SPOP_SBC_1
0.0556
p.G922R
DO47563
SKCM
ICGC
PITST
DEG_SPOP_SBC_1
0.0556
p.T901I
TCGA-FG-A4MU
LGG
TCGA
PITST
DEG_SPOP_SBC_1
0.1389
p.T901I
DO44558
LGG
ICGC
PITST
DEG_SPOP_SBC_1
0.1389
p.E921K
TCGA-FR-A69P
SKCM
TCGA
PITST
DEG_SPOP_SBC_1
0.0833
p.E921K
DO47292
SKCM
ICGC
PITST
DEG_SPOP_SBC_1
0.0833
p.S911R
DO9940
COAD
ICGC
PITST
DEG_SPOP_SBC_1
0.7427
p.S911D
DO222743
MELA
ICGC
PITST
DEG_SPOP_SBC_1
0.6871
p.I909L
DO232869
PBCA
ICGC
PITST
DEG_SPOP_SBC_1
0.6063
p.V907D
HEL
haematopoietic_and_lymphoid_tissue
COSMIC
PITST
DEG_SPOP_SBC_1
0.3056
p.V907D
CMK
haematopoietic_and_lymphoid_tissue
COSMIC
PITST
DEG_SPOP_SBC_1
0.3056
p.T917A
LS-411N
large_intestine
COSMIC
PITST
DEG_SPOP_SBC_1
0.1944
p.A905V
LNCaP-Clone-FGC
prostate
COSMIC
PITST
DEG_SPOP_SBC_1
0.3611
Drug responses associated with VCAN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PITST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P13611
Versican core protein
DEG_SPOP_SBC_1
908:912
PITST
SPOP
0.9967
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3787:3791
PITST
SPOP
0.5313
More...
Q5JSP0
FYVE, RhoGEF and PH domain-containing protein 3
DEG_SPOP_SBC_1
498:502
PITST
SPOP
0.9839
More...
Q9BVL2
Nucleoporin p58/p45
DEG_SPOP_SBC_1
125:129
PITST
SPOP
0.9804
More...
Q9H195
Mucin-3B
DEG_SPOP_SBC_1
259:263
PITST
SPOP
0.9811
More...