DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPAPS
Uniprot ID:
Q9Y467
Source protein:
Sal-like protein 2
Source gene:
SALL2
Class:
DEG_SCF_FBW7_1
Location:
298:303
E3 ligase:
FBXW7
DEGRON score:
0.9808
ASA_SCORE:
87.2333
COIL:
0.9552
CONS_SCORE:
0.476
DSS_SCORE:
0.7186
HELIX:
0.0098
FCONS_SCORE:
1.1155
RIG_SCORE:
0.5727
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R294Q
TCGA-58-8387
LUSC
TCGA
PTPAPS
DEG_SCF_FBW7_1
0.2222
p.R294Q
TCGA-AZ-6598
COAD
TCGA
PTPAPS
DEG_SCF_FBW7_1
0.2222
p.R294Q
TCGA-B5-A11Y
UCEC
TCGA
PTPAPS
DEG_SCF_FBW7_1
0.2222
p.R294Q
TCGA-CV-A6JZ
HNSC
TCGA
PTPAPS
DEG_SCF_FBW7_1
0.2222
p.R294Q
TCGA-R6-A6KZ
ESCA
TCGA
PTPAPS
DEG_SCF_FBW7_1
0.2222
p.P302L
TCGA-FW-A3R5
SKCM
TCGA
PTPAPS
DEG_SCF_FBW7_1
0.6471
p.V307L
DO44037
BLCA
ICGC
PTPAPS
DEG_SCF_FBW7_1
0.2222
p.P291T
DO223732
CESC
ICGC
PTPAPS
DEG_SCF_FBW7_1
0.1389
p.N296S
DO233258
GACA
ICGC
PTPAPS
DEG_SCF_FBW7_1
0.2778
p.S310C
DO228380
LICA
ICGC
PTPAPS
DEG_SCF_FBW7_1
0.1389
p.P297Q
DO228952
LICA
ICGC
PTPAPS
DEG_SCF_FBW7_1
0.3056
p.D305E
DO229025
LICA
ICGC
PTPAPS
DEG_SCF_FBW7_1
0.2778
p.T309N
DO229008
LICA
ICGC
PTPAPS
DEG_SCF_FBW7_1
0.1667
p.K289R
DO23314
LINC
ICGC
PTPAPS
DEG_SCF_FBW7_1
0.0833
p.D305H
DO27074
LUSC
ICGC
PTPAPS
DEG_SCF_FBW7_1
0.2778
p.P297L
DO47331
SKCM
ICGC
PTPAPS
DEG_SCF_FBW7_1
0.3056
p.V292L
SIDM00703
Non-Small Cell Lung Carcinoma
GDSC
PTPAPS
DEG_SCF_FBW7_1
0.1667
p.V292L
ACH-000929
Lung Cancer
CCLE
PTPAPS
DEG_SCF_FBW7_1
0.1667
p.V292L
NCI-H2110
lung
COSMIC
PTPAPS
DEG_SCF_FBW7_1
0.1667
p.P307S
SIDM00153
T-Lymphoblastic Leukemia
GDSC
PTPAPS
DEG_SCF_FBW7_1
0.2222
p.P307S
ACH-000964
Leukemia
CCLE
PTPAPS
DEG_SCF_FBW7_1
0.2222
p.P304S
ACH-002287
Colon/Colorectal Cancer
CCLE
PTPAPS
DEG_SCF_FBW7_1
0.3056
p.Y306C
GP5d
large_intestine
COSMIC
PTPAPS
DEG_SCF_FBW7_1
0.25
Drug responses associated with SALL2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPAPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P46695
Radiation-inducible immediate-early gene IEX-1
DEG_SCF_FBW7_1
17:22
PTPAPS
FBXW7
0.9989
More...
Q07157
Tight junction protein ZO-1
DEG_SCF_FBW7_1
959:964
PTPAPS
FBXW7
0.9995
More...
Q9H987
Synaptopodin 2-like protein
DEG_SCF_FBW7_1
457:462
PTPAPS
FBXW7
0.9753
More...
Q9Y467
Sal-like protein 2
DEG_SCF_FBW7_1
298:303
PTPAPS
FBXW7
0.9808
More...