DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPGAS
Uniprot ID:
O75533
Source protein:
Splicing factor 3B subunit 1
Source gene:
SF3B1
Class:
DEG_SCF_FBW7_1
Location:
327:332
E3 ligase:
FBXW7
DEGRON score:
0.9834
ASA_SCORE:
70.1333
COIL:
0.9468
CONS_SCORE:
0.314
DSS_SCORE:
0.7577
HELIX:
0.02
FCONS_SCORE:
0.7459
RIG_SCORE:
0.605
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I323V
TCGA-56-7731
LUSC
TCGA
PTPGAS
DEG_SCF_FBW7_1
0.2222
p.I323V
DO45527
LUSC
ICGC
PTPGAS
DEG_SCF_FBW7_1
0.2222
p.P327L
TCGA-A5-A0G2
UCEC
TCGA
PTPGAS
DEG_SCF_FBW7_1
0.6471
p.P327L
DO41235
UCEC
ICGC
PTPGAS
DEG_SCF_FBW7_1
0.6471
p.P327L
ACH-001377
Pancreatic Cancer
CCLE
PTPGAS
DEG_SCF_FBW7_1
0.6471
p.R334I
TCGA-BS-A0UV
UCEC
TCGA
PTPGAS
DEG_SCF_FBW7_1
0.2778
p.R334I
DO42793
UCEC
ICGC
PTPGAS
DEG_SCF_FBW7_1
0.2778
p.D321V
TCGA-DD-AAE3
LIHC
TCGA
PTPGAS
DEG_SCF_FBW7_1
0.1667
p.D321V
DO52258
LIHC
ICGC
PTPGAS
DEG_SCF_FBW7_1
0.1667
p.P327R
TCGA-VQ-A91S
STAD
TCGA
PTPGAS
DEG_SCF_FBW7_1
0.7512
p.P327R
DO222352
STAD
ICGC
PTPGAS
DEG_SCF_FBW7_1
0.7512
p.A331D
DO229028
LICA
ICGC
PTPGAS
DEG_SCF_FBW7_1
0.6682
p.A331D
DO229045
LICA
ICGC
PTPGAS
DEG_SCF_FBW7_1
0.6682
p.P342T
DO229027
LICA
ICGC
PTPGAS
DEG_SCF_FBW7_1
0.0556
Drug responses associated with SF3B1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPGAS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75533
Splicing factor 3B subunit 1
DEG_SCF_FBW7_1
327:332
PTPGAS
FBXW7
0.9834
More...
Q86TM6
E3 ubiquitin-protein ligase synoviolin
DEG_SCF_FBW7_1
567:572
PTPGAS
FBXW7
0.9928
More...
Q8NAG6
Ankyrin repeat and LEM domain-containing protein 1
DEG_SCF_FBW7_1
310:315
PTPGAS
FBXW7
0.9884
More...
Q5VZ18
SH2 domain-containing adapter protein E
DEG_SCF_FBW7_1
5:10
PTPGAS
FBXW7
0.9762
More...