DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RKENI
Uniprot ID:
Q4LE39
Source protein:
AT-rich interactive domain-containing protein 4B
Source gene:
ARID4B
Class:
DEG_APCC_KENBOX_2
Location:
461:465
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9638
ASA_SCORE:
113.1
COIL:
0.57
CONS_SCORE:
0.3413
DSS_SCORE:
0.5464
HELIX:
0.3888
FCONS_SCORE:
1.0776
RIG_SCORE:
0.7148
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E460K
TCGA-GV-A3JZ
BLCA
TCGA
RKENI
DEG_APCC_KENBOX_2
0.3056
p.E460K
DO773
BLCA
ICGC
RKENI
DEG_APCC_KENBOX_2
0.3056
p.E460Q
TCGA-YC-A9TC
BLCA
TCGA
RKENI
DEG_APCC_KENBOX_2
0.3056
p.E460Q
DO51949
BLCA
ICGC
RKENI
DEG_APCC_KENBOX_2
0.3056
p.P454T
DO229018
LICA
ICGC
RKENI
DEG_APCC_KENBOX_2
0.1389
p.E463G
SIDM01044
Other Solid Cancers
GDSC
RKENI
DEG_APCC_KENBOX_2
0.7199
p.E463G
ACH-000585
Lung Cancer
CCLE
RKENI
DEG_APCC_KENBOX_2
0.7199
p.E463G
EPLC-272H
lung
COSMIC
RKENI
DEG_APCC_KENBOX_2
0.7199
p.I459V
SIDM00679
Cervical Carcinoma
GDSC
RKENI
DEG_APCC_KENBOX_2
0.2778
p.I459V
ACH-001525
Cervical Cancer
CCLE
RKENI
DEG_APCC_KENBOX_2
0.2778
p.I459V
HT-3
cervix
COSMIC
RKENI
DEG_APCC_KENBOX_2
0.2778
p.I465V
SIDM01608
Endometrial Carcinoma
GDSC
RKENI
DEG_APCC_KENBOX_2
0.5965
p.I465V
ACH-000990
Endometrial/Uterine Cancer
CCLE
RKENI
DEG_APCC_KENBOX_2
0.5965
Drug responses associated with ARID4B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RKENI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43166
Signal-induced proliferation-associated 1-like protein 1
DEG_APCC_KENBOX_2
86:90
RKENI
APC,CDC20,FZR1
0.9334
More...
Q4LE39
AT-rich interactive domain-containing protein 4B
DEG_APCC_KENBOX_2
461:465
RKENI
APC,CDC20,FZR1
0.9638
More...
Q5T5P2
Sickle tail protein homolog
DEG_APCC_KENBOX_2
1075:1079
RKENI
APC,CDC20,FZR1
0.9909
More...
Q8N7X0
Androglobin
DEG_APCC_KENBOX_2
1508:1512
RKENI
APC,CDC20,FZR1
0.8902
More...