DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RKENI
Uniprot ID:
Q5T5P2
Source protein:
Sickle tail protein homolog
Source gene:
KIAA1217
Class:
DEG_APCC_KENBOX_2
Location:
1075:1079
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9909
ASA_SCORE:
126.24
COIL:
0.9146
CONS_SCORE:
0.3175
DSS_SCORE:
0.5803
HELIX:
0.0398
FCONS_SCORE:
0.8847
RIG_SCORE:
0.7453
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1069N
TCGA-B5-A3FC
UCEC
TCGA
RKENI
DEG_APCC_KENBOX_2
0.1667
p.K1082N
TCGA-BR-A4CQ
STAD
TCGA
RKENI
DEG_APCC_KENBOX_2
0.3611
p.K1082E
TCGA-PG-A5BC
UCEC
TCGA
RKENI
DEG_APCC_KENBOX_2
0.3611
p.G1074S
SIDM00819
Kidney Carcinoma
GDSC
RKENI
DEG_APCC_KENBOX_2
0.3056
p.G1089R
SIDM00011
Melanoma
GDSC
RKENI
DEG_APCC_KENBOX_2
0.0556
p.E1066K
SW900
lung
COSMIC
RKENI
DEG_APCC_KENBOX_2
0.0833
p.T1074N
LN-229
central_nervous_system
COSMIC
RKENI
DEG_APCC_KENBOX_2
0.3056
p.P1077L
FADU
upper_aerodigestive_tract
COSMIC
RKENI
DEG_APCC_KENBOX_2
0.7582
p.K1076N
CW-2
large_intestine
COSMIC
RKENI
DEG_APCC_KENBOX_2
0.6918
p.P1078L
FADU
upper_aerodigestive_tract
COSMIC
RKENI
DEG_APCC_KENBOX_2
0.7582
p.E1067K
SW900
lung
COSMIC
RKENI
DEG_APCC_KENBOX_2
0.5556
p.T1073N
LN-229
central_nervous_system
COSMIC
RKENI
DEG_APCC_KENBOX_2
0.7222
Drug responses associated with KIAA1217 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RKENI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43166
Signal-induced proliferation-associated 1-like protein 1
DEG_APCC_KENBOX_2
86:90
RKENI
APC,CDC20,FZR1
0.9334
More...
Q4LE39
AT-rich interactive domain-containing protein 4B
DEG_APCC_KENBOX_2
461:465
RKENI
APC,CDC20,FZR1
0.9638
More...
Q5T5P2
Sickle tail protein homolog
DEG_APCC_KENBOX_2
1075:1079
RKENI
APC,CDC20,FZR1
0.9909
More...
Q8N7X0
Androglobin
DEG_APCC_KENBOX_2
1508:1512
RKENI
APC,CDC20,FZR1
0.8902
More...