DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RKENP
Uniprot ID:
Q99708
Source protein:
DNA endonuclease RBBP8
Source gene:
RBBP8
Class:
DEG_APCC_KENBOX_2
Location:
178:182
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8804
ASA_SCORE:
121.78
COIL:
0.8494
CONS_SCORE:
0.4966
DSS_SCORE:
0.4033
HELIX:
0.11
FCONS_SCORE:
1.0548
RIG_SCORE:
0.7057
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y186C
TCGA-AA-3977
COAD
TCGA
RKENP
DEG_APCC_KENBOX_2
0.2222
p.Y186C
DO8730
COAD
ICGC
RKENP
DEG_APCC_KENBOX_2
0.2222
p.R175L
DO228986
LICA
ICGC
RKENP
DEG_APCC_KENBOX_2
0.25
p.R177L
DO229041
LICA
ICGC
RKENP
DEG_APCC_KENBOX_2
0.3056
Drug responses associated with RBBP8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RKENP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O76080
AN1-type zinc finger protein 5
DEG_APCC_KENBOX_2
199:203
RKENP
APC,CDC20,FZR1
0.5072
More...
Q99708
DNA endonuclease RBBP8
DEG_APCC_KENBOX_2
178:182
RKENP
APC,CDC20,FZR1
0.8804
More...
Q9C040
Tripartite motif-containing protein 2
DEG_APCC_KENBOX_2
463:467
RKENP
APC,CDC20,FZR1
0.6409
More...
Q9P1Y6
PHD and RING finger domain-containing protein 1
DEG_APCC_KENBOX_2
809:813
RKENP
APC,CDC20,FZR1
0.999
More...