DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENF
Uniprot ID:
O75330
Source protein:
Hyaluronan mediated motility receptor
Source gene:
HMMR
Class:
DEG_APCC_KENBOX_2
Location:
695:699
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9622
ASA_SCORE:
102.88
COIL:
0.5364
CONS_SCORE:
0.5666
DSS_SCORE:
0.4776
HELIX:
0.436
FCONS_SCORE:
1.0006
RIG_SCORE:
0.7182
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F686C
TCGA-B5-A1MR
UCEC
TCGA
SKENF
DEG_APCC_KENBOX_2
0.0833
p.G709S
TCGA-FR-A726
SKCM
TCGA
SKENF
DEG_APCC_KENBOX_2
0.0556
p.A685S
DO228939
LICA
ICGC
SKENF
DEG_APCC_KENBOX_2
0.0556
p.K691E
DO222438
MELA
ICGC
SKENF
DEG_APCC_KENBOX_2
0.2222
p.K691E
DO37423
SKCM
ICGC
SKENF
DEG_APCC_KENBOX_2
0.2222
p.G693S
DO48665
SKCM
ICGC
SKENF
DEG_APCC_KENBOX_2
0.2778
p.H692Y
ACH-001041
Skin Cancer
CCLE
SKENF
DEG_APCC_KENBOX_2
0.25
Drug responses associated with HMMR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75330
Hyaluronan mediated motility receptor
DEG_APCC_KENBOX_2
695:699
SKENF
APC,CDC20,FZR1
0.9622
More...
O95425
Supervillin
DEG_APCC_KENBOX_2
1414:1418
SKENF
APC,CDC20,FZR1
0.9572
More...
Q8NCD3
Holliday junction recognition protein
DEG_APCC_KENBOX_2
320:324
SKENF
APC,CDC20,FZR1
0.9053
More...
Q9Y2R2
Tyrosine-protein phosphatase non-receptor type 22
DEG_APCC_KENBOX_2
465:469
SKENF
APC,CDC20,FZR1
0.9549
More...