DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENF
Uniprot ID:
Q8NCD3
Source protein:
Holliday junction recognition protein
Source gene:
HJURP
Class:
DEG_APCC_KENBOX_2
Location:
320:324
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9053
ASA_SCORE:
104.08
COIL:
0.8572
CONS_SCORE:
0.3958
DSS_SCORE:
0.4765
HELIX:
0.098
FCONS_SCORE:
0.7939
RIG_SCORE:
0.6839
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q317H
TCGA-05-4396
LUAD
TCGA
SKENF
DEG_APCC_KENBOX_2
0.25
p.E329Q
TCGA-AX-A2IO
UCEC
TCGA
SKENF
DEG_APCC_KENBOX_2
0.1944
p.E329Q
DO40800
UCEC
ICGC
SKENF
DEG_APCC_KENBOX_2
0.1944
p.G333V
TCGA-B6-A0IJ
BRCA
TCGA
SKENF
DEG_APCC_KENBOX_2
0.0833
p.G333V
DO2813
BRCA
ICGC
SKENF
DEG_APCC_KENBOX_2
0.0833
p.P326S
TCGA-F4-6703
COAD
TCGA
SKENF
DEG_APCC_KENBOX_2
0.2778
p.R318T
DO230316
COCA
ICGC
SKENF
DEG_APCC_KENBOX_2
0.2778
p.R315C
DO227973
COCA
ICGC
SKENF
DEG_APCC_KENBOX_2
0.1944
p.S327Y
DO222762
COCA
ICGC
SKENF
DEG_APCC_KENBOX_2
0.25
p.V325M
DO23866
LUAD
ICGC
SKENF
DEG_APCC_KENBOX_2
0.3056
p.L333F
DO219173
LUSC
ICGC
SKENF
DEG_APCC_KENBOX_2
0.0833
p.P326L
DO220899
MELA
ICGC
SKENF
DEG_APCC_KENBOX_2
0.2778
p.S320F
SIDM00007
Other Solid Cancers
GDSC
SKENF
DEG_APCC_KENBOX_2
0.6871
p.S320F
ACH-001550
Skin Cancer
CCLE
SKENF
DEG_APCC_KENBOX_2
0.6871
p.S320F
MCC13
skin
COSMIC
SKENF
DEG_APCC_KENBOX_2
0.6871
p.G333E
SIDM00256
Neuroblastoma
GDSC
SKENF
DEG_APCC_KENBOX_2
0.0833
p.R315G
SIDM01686
Chronic Myelogenous Leukemia
GDSC
SKENF
DEG_APCC_KENBOX_2
0.1944
p.R315G
ACH-000462
Leukemia
CCLE
SKENF
DEG_APCC_KENBOX_2
0.1944
p.V325L
ESS-1
endometrium
COSMIC
SKENF
DEG_APCC_KENBOX_2
0.3056
p.V329L
EMC-BAC-1
lung
COSMIC
SKENF
DEG_APCC_KENBOX_2
0.1944
p.R320M
KM12
large_intestine
COSMIC
SKENF
DEG_APCC_KENBOX_2
0.8632
Drug responses associated with HJURP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75330
Hyaluronan mediated motility receptor
DEG_APCC_KENBOX_2
695:699
SKENF
APC,CDC20,FZR1
0.9622
More...
O95425
Supervillin
DEG_APCC_KENBOX_2
1414:1418
SKENF
APC,CDC20,FZR1
0.9572
More...
Q8NCD3
Holliday junction recognition protein
DEG_APCC_KENBOX_2
320:324
SKENF
APC,CDC20,FZR1
0.9053
More...
Q9Y2R2
Tyrosine-protein phosphatase non-receptor type 22
DEG_APCC_KENBOX_2
465:469
SKENF
APC,CDC20,FZR1
0.9549
More...