DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKENN
Uniprot ID:
P29508
Source protein:
Serpin B3
Source gene:
SERPINB3
Class:
DEG_APCC_KENBOX_2
Location:
22:26
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5575
ASA_SCORE:
81.92
COIL:
0.906
CONS_SCORE:
0.3476
DSS_SCORE:
0.1106
HELIX:
0.0438
FCONS_SCORE:
0.6293
RIG_SCORE:
0.7896
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F28L
TCGA-06-5416
GBM
TCGA
SKENN
DEG_APCC_KENBOX_2
0.2778
p.F28L
DO10880
GBM
ICGC
SKENN
DEG_APCC_KENBOX_2
0.2778
p.P31L
TCGA-55-6970
LUAD
TCGA
SKENN
DEG_APCC_KENBOX_2
0.1944
p.P31L
DO24421
LUAD
ICGC
SKENN
DEG_APCC_KENBOX_2
0.1944
p.D14N
TCGA-AX-A1C9
UCEC
TCGA
SKENN
DEG_APCC_KENBOX_2
0.1111
p.D14N
DO43098
UCEC
ICGC
SKENN
DEG_APCC_KENBOX_2
0.1111
p.D14H
TCGA-BA-4077
HNSC
TCGA
SKENN
DEG_APCC_KENBOX_2
0.1111
p.D14H
DO15647
HNSC
ICGC
SKENN
DEG_APCC_KENBOX_2
0.1111
p.D14H
SIDM01133
Other Solid Cancers
GDSC
SKENN
DEG_APCC_KENBOX_2
0.1111
p.R20S
TCGA-EY-A1GD
UCEC
TCGA
SKENN
DEG_APCC_KENBOX_2
0.2778
p.R20S
DO42129
UCEC
ICGC
SKENN
DEG_APCC_KENBOX_2
0.2778
p.R20S
SIDM00767
Small Cell Lung Carcinoma
GDSC
SKENN
DEG_APCC_KENBOX_2
0.2778
p.R20S
ACH-001136
Lung Cancer
CCLE
SKENN
DEG_APCC_KENBOX_2
0.2778
p.R20S
NCI-H187
lung
COSMIC
SKENN
DEG_APCC_KENBOX_2
0.2778
p.S22L
TCGA-GN-A8LK
SKCM
TCGA
SKENN
DEG_APCC_KENBOX_2
0.6556
p.S22L
DO51259
SKCM
ICGC
SKENN
DEG_APCC_KENBOX_2
0.6556
p.L15M
TCGA-KC-A4BR
PRAD
TCGA
SKENN
DEG_APCC_KENBOX_2
0.1389
p.L15M
DO228548
PRAD
ICGC
SKENN
DEG_APCC_KENBOX_2
0.1389
p.L15M
DO219279
PRAD
ICGC
SKENN
DEG_APCC_KENBOX_2
0.1389
p.T35K
DO228986
LICA
ICGC
SKENN
DEG_APCC_KENBOX_2
0.5278
p.F13L
DO229028
LICA
ICGC
SKENN
DEG_APCC_KENBOX_2
0.0833
p.S33R
DO229034
LICA
ICGC
SKENN
DEG_APCC_KENBOX_2
0.1389
p.N25K
DO229038
LICA
ICGC
SKENN
DEG_APCC_KENBOX_2
0.6918
p.P31T
DO231758
LINC
ICGC
SKENN
DEG_APCC_KENBOX_2
0.1944
Drug responses associated with SERPINB3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P29508
Serpin B3
DEG_APCC_KENBOX_2
22:26
SKENN
APC,CDC20,FZR1
0.5575
More...
Q02446
Transcription factor Sp4
DEG_APCC_KENBOX_2
112:116
SKENN
APC,CDC20,FZR1
0.8709
More...
Q86W56
Poly
DEG_APCC_KENBOX_2
98:102
SKENN
APC,CDC20,FZR1
0.9861
More...
Q9BXS6
Nucleolar and spindle-associated protein 1
DEG_APCC_KENBOX_2
383:387
SKENN
APC,CDC20,FZR1
0.7978
More...